Dendrobium catenatum: 110097186
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Entry
110097186 CDS
T05027
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X2
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110097186
Enzymes [BR:
dct01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
110097186
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110097186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_23
MetW
Ubie_methyltran
DUF5501
Motif
Other DBs
NCBI-GeneID:
110097186
NCBI-ProteinID:
XP_020679091
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MNVLLLPFVTKSVRFISQLLERNASQNLVPVSDSSTRSTGKSVKFCSMVASTTMTDASKY
QESDSAKIDTPCSANVCATPDIEKKYVHHVYNAIAPHFSATRFARWPKVASFLNSLSPGA
VILDAGCGNGKYLGFNPNCFYIGCDISPSLIDICAKKDHEVLVADAVNLPYKTNFGDAAI
SIAVLHHLSTESRRRKAIEELIRVVRKGGTVLITVWAVEQEDSSLLSKWTPLSEKYNEGW
VSGSIPQVRNSAALMLKQIPEANEDCCSTTGISKHRYAHPGYVEEGRREDNVFAASFCNG
IQEDAISSSKAVTNQEYFVPWHLPYHRAEVNGTSTTAIANGLAKKDDKKGAVVYNRYYHV
FAEGELQRLVTGIENAATVEQFYDKSNWCIILQKR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttgctgctcccatttgtgacaaagtcagtaagatttatttcccaacttcta
gaacgtaacgcctcccaaaatctggtcccagtctctgactccagcaccagatctactgga
aaatccgtgaaattttgcagcatggtggcttccactactatgacggatgcttcaaaatat
caagaatctgattcggcgaaaattgacactccttgctcagcaaatgtctgtgccactcca
gatattgaaaaaaaatatgtacaccatgtttataatgccattgctccacattttagtgct
acaagatttgctagatggcctaaagttgctagctttttgaattccttgagtcccggtgct
gtcatattggatgctggttgtggaaatggtaagtacttgggcttcaatccgaactgcttt
tacataggctgtgatatcagcccatctttgatcgatatatgtgcaaagaaagatcatgaa
gttttggttgctgatgcggttaatctaccttacaaaacaaattttggtgatgctgctatt
tctattgccgttcttcatcacctgagcacagaaagcaggagaaggaaggctatagaagag
ttaattcgagtggtacgaaaaggtggaactgttctaattacggtttgggctgtagagcaa
gaggatagttcattgctttcaaagtggaccccactttctgagaagtacaatgaaggatgg
gtaagtggtagcattcctcaagtgcgtaattctgcagcactgatgctaaagcagattcca
gaggcaaatgaagattgttgctctacaactggtatatccaaacatagatacgctcatcca
ggatatgttgaagaaggtagaagggaggataatgtgttcgctgcttctttttgtaatggg
atacaagaggatgccatttcctctagtaaagctgttactaatcaagaatactttgttcct
tggcatttgccatatcatcgggctgaagttaatggcacatcgactactgcaattgcaaat
ggattggcaaagaaagatgataagaagggggctgtggtgtataaccgctattatcatgta
tttgctgaaggtgaacttcaaaggttagttactggcatagagaatgcagcgactgttgag
cagttctatgataaatccaattggtgtatcattcttcagaagagatga
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