Dendrobium catenatum: 110097517
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Entry
110097517 CDS
T05027
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110097517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110097517
03400 DNA repair and recombination proteins [BR:
dct03400
]
110097517
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110097517
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110097517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
110097517
NCBI-ProteinID:
XP_020679576
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MSARSGTFSGTNVFLSRNLVPPEVFDAIHDALRLNGAQVFLCCDASRTAPNDYHVISSPD
HEKFEDLKAKGCNLVGPQCIFSCAKEYRMLPKHGYTCCLAMDGVKVLASGFERDEKAMIE
KLVTAMGGVLQAKAAMDVNFVIVKNVLAAKYKWALHVLKKPIVNMSWLCQCWIEHRVVPQ
EPYRILPFMGLTICVTRIPADERKEIERLIIQNGGQYSADLTKKCSHLVSDAPAGDKYVV
AQRWGHIHIVSRKWIDQSISRRACLDERLYPVLEISLSGNDAKVLHKEQYFQEPSNVTSQ
LLPPTNIEDLEAASSQNISISETSTIKSEVAVAEAYPGKMEDKNVETNSEHVEDKVKFDC
RVAQDSEEDDDLYLSSCRIFLAGFEEKELRKLVNMIRRGGGTRHMLLSEKLSHIILGTPS
ESEKKEIRRLAVSGVINVVNATWLEESDQAKRELPVSSRHIFSALMISKDSTYSCMEPSV
VDQGVKKVENIRVFSFATTSPVTEDKVLVSKPLSNEKQGTNESCPIVNGFTEVVTKCEAS
RQHSIMKVNQTHESKLHMVSARGDSSNSKAVFKGKSFCFSSSFPVEPRAEVIEWVKGGGG
GTLLDDQATNADFIIESHGLSQSLCASIFQSTSVSTHWIRASIEECCMQDVASHILYSPL
NCHIPLPGFEDLRFCVSQYEGKERILLRNLCFVLGAKFTEKLTKKVTHLLCKFTNGPKYT
AACRKGIQTVTAEWITECVSQDKLVPPDLFQPRPVTSQDKEAGLCTVSQHPTQAVRMISF
PSQSPSQPQGLMQNSRMNVGSSSDGKRLNLSELDRNTRASKRKKVKEILGENRKTGPDVA
EAIEDLLAQSDKIQDLKSPGTSGNGSNLQIFAPDPPIIDQNHGNSNTASGISNNWIIREQ
KQGSISHPTNQARKSGAYDAFTETQTESQVVGYEEDLSGRQKIIERVRSQSLTLTPDVR
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaggagtggcacatttagcggtacgaatgtcttcctctccagaaacctggtc
ccgcccgaggtttttgacgccatccacgatgccctccgactgaacggcgctcaggtcttc
ctatgctgcgatgcctcccggacggcccccaacgattaccacgtcatttcttctccggat
cacgaaaagtttgaggatcttaaggcaaagggctgcaatcttgtaggtccacaatgtatt
ttctcatgtgcgaaagagtacaggatgttgcccaagcatggctatacctgctgccttgca
atggatggagtaaaagttcttgcttctggatttgagagggatgaaaaggccatgattgaa
aagctagtcactgctatgggtggagttttgcaggccaaggcagcaatggatgtgaacttt
gtcattgtgaagaatgttttggctgctaagtataagtgggctttacatgttcttaagaaa
cccatcgttaacatgagctggttatgccaatgttggattgagcatcgagtagtgccccaa
gagccttacaggattcttccttttatggggttgacaatctgtgttaccagaattcctgca
gatgaacggaaggagattgaaaggctgatcatacagaatggtggccagtattctgctgat
ctgaccaaaaaatgctcccatttagtttcagatgctccagctggagacaagtatgttgtt
gcacaaagatggggtcatatacatattgttagccgcaaatggattgatcaatccatttca
agacgagcctgtctggatgagcggctgtatcctgttcttgaaatttctctttctggtaat
gatgcaaaagttttgcataaggagcaatatttccaagaacccagtaatgtaacctcacag
cttctgccaccaaccaatattgaggacctagaagcagcttcatcacagaacatctctatt
tcagaaacctctaccattaaaagtgaggttgcagttgcagaagcatatcctgggaagatg
gaagacaaaaatgttgaaacaaattctgaacatgtggaagacaaagttaaatttgattgc
cgagtggctcaagattcagaagaagatgatgatctttatttatcaagttgcagaatcttt
ctggctggctttgaggagaaggaattgagaaagttagttaatatgatacgaagaggtgga
ggcactcggcatatgttattgagtgaaaagctgtcacacataattttaggcacaccttca
gagtcagaaaagaaagaaataagacgcttggctgtttcgggcgtcattaatgtggttaat
gccacctggcttgaggaatctgatcaggcaaagagagagcttcctgtatcatccaggcac
attttttccgccttaatgatttcaaaggattcaacatattcttgtatggagccatctgtt
gttgatcaaggtgtcaagaaggttgaaaatattcgtgttttttcttttgcaacaactagt
cctgttacagaggataaagttcttgtatccaagccgttatctaatgaaaagcaaggaacc
aatgagagctgcccaatcgttaatggcttcacagaagtagtcactaagtgtgaagcatca
cgccagcattccattatgaaagttaatcagacacatgaaagcaaattgcatatggtttct
gccaggggggattcttcgaatagtaaagcagttttcaaggggaagtcattttgtttttca
agctcatttccggtagaacctcgggctgaagttattgaatgggttaaaggaggaggagga
gggactttgttggatgaccaagcaacaaatgctgatttcatcatcgagtctcatggtctt
tcacagagtttgtgtgctagtatttttcaatctacttctgtttccacgcattggatacgc
gcctctattgaggagtgctgcatgcaagatgttgcaagccacatactttactctccattg
aactgccatattccgttacctggatttgaagacctccgattctgtgtttcccaatatgaa
gggaaagagagaatattattaaggaatttatgctttgtcttgggagcaaaattcaccgag
aagctaaccaagaaagttactcatttattatgcaagttcactaatggtccaaaatacaca
gctgcttgtagaaagggcattcaaacagttactgctgagtggatcactgaatgcgtctcg
caggataaattggttccacctgatttatttcagccaaggccagtaacttcacaggataaa
gaggcaggtttatgtactgtgagtcagcatccaacacaggcagttcgcatgatttccttc
ccatcacaatcacctagtcaaccccaaggactgatgcaaaactcaagaatgaacgttggt
tcaagttctgatggaaaaaggttgaacttatcggaattggatagaaatactcgtgcatct
aaaagaaaaaaagtaaaagaaattcttggggaaaatcgcaaaactggtcctgatgtggcc
gaagccatagaggatctgttagcgcagtcagacaagattcaagacctaaaatcgcctggg
acgtctggtaatggaagtaatttacagatatttgcgcctgatcctcctattattgatcaa
aatcatggaaattcaaatactgcttctggaatatcaaacaattggataatccgggagcag
aaacaaggaagcatttcccatccaacaaaccaagcaagaaagtctggcgcatatgatgct
tttactgaaacacaaacagaatcacaggtagttgggtatgaggaagacttgtcaggcagg
cagaaaataattgagagagttcgatcacagagcttgacattgacgccagatgtgagatga
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