Dendrobium catenatum: 110097686
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Entry
110097686 CDS
T05027
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
dct
Dendrobium catenatum
Pathway
dct04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110097686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110097686
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110097686
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_6
Motif
Other DBs
NCBI-GeneID:
110097686
NCBI-ProteinID:
XP_020679863
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MGGGGWAAEAMFPDEVWEYVFSFVEADADRNAISVVCRGWYRIEGRCRRRIFVGNCYAVS
PATALRRFPEIKAVTIKGKPHFADFNLVPSDWGGGAAAWVEALAEACPQMEELRFKRMVV
TDDCLELIGRSFRNFKVLSLASCEGFSTAGLAFVASNCRNLRELDLLENDFEDNCSHWLS
HFPESCTSLISLNIASLDGEMNYSILERLVSRCSKLKTLKLNHSVPLDRLAGILCKAPQL
IDLGTGRFSADSRPELFERLESSFTGFTGLKSLSGLYDAVPAYLPTIYSVCDGLSSLNLS
YATLQSAELTKLITRCKNLKRLWVMDLIEDVGLEAVASSCKHIEELRVFPFDPYDAEPVS
LTERGLVSVSAGCPMLRSVLYFCRQMTNAALITVAMNSPSLTCFRLCILEPRTPDYLTQQ
PLDIGFSAIVQSCKELRRLSLSGRLTDRVFHSIGAYANQVKMLSVAFAGDSDAGLHYILS
GCRSLKKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSISFGACRLLAQRMPRLNVEVI
DERQEGSLESRPNDCPVEKLYIYRTVAGPRSDMPACVWTV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggggggtgggcggcggaggcgatgttcccggacgaggtatgggagtacgtg
ttctcttttgtggaggcggacgcggacaggaacgcgatctcggtggtgtgccgggggtgg
taccggatcgaggggcgttgcaggcgtcggatctttgttgggaactgctacgctgtttct
ccggcgacggcgttacgacgttttcctgaaatcaaggcggtgaccatcaaagggaagcct
cattttgcggatttcaatcttgtgccgagcgactggggcggcggagctgctgcgtgggtg
gaggccttggcggaggcgtgtccgcagatggaggagcttcggttcaagagaatggtggtc
acggatgactgccttgagcttatcgggaggtcattcaggaactttaaggtgctctcgctt
gcgtcgtgcgagggattcagcactgctgggttggcattcgtcgcttccaattgccgaaac
ctaagggagttggacctgctggagaatgattttgaagataattgtagccattggctgagt
catttcccagaatcttgtacctcgttgatatcacttaacattgcaagccttgatggggag
atgaattattctatcctcgagcggcttgtgagcagatgctctaagctcaaaacactcaag
ctcaaccactctgtgcctcttgatcggcttgctggcattctctgtaaggccccacaattg
attgacctgggaactggcaggttttcagcagactctcgtccagagctttttgaaagactt
gaatcatcatttacaggatttacaggtctcaaaagcttatctggtctttatgatgctgtt
cctgcatatcttccaactatctactcagtgtgtgatggacttagctcactaaatttgagc
tatgctaccttgcaaagtgctgaacttacaaagctaattacccggtgtaaaaatctcaag
cgcttatgggttatggacttgattgaggatgttggccttgaagcagttgcatcatcttgc
aagcacattgaagagcttcgtgttttccctttcgatccatatgatgcagaacctgtatct
ctcacagagcgtgggcttgtcagcgtgtcagctggttgtccaatgcttcgctccgtgctc
tacttttgccggcaaatgacaaatgcggcgctcatcaccgttgcaatgaacagccccagt
ttgacatgttttcgactttgcatcctagagccacgaacccccgattatctcacacaacag
ccactagatatcggcttcagcgccattgttcaatcatgcaaggagctccgtcgtctctcc
ctctctggccgccttaccgaccgcgtgttccatagcattggagcatatgcaaatcaggtt
aaaatgctgtcagttgcctttgctggagacagtgacgctggccttcattatattctatca
ggttgcaggagtcttaaaaaactggagatcagggattgtccttttggggataaggctctt
ctcgccaatgctgcgaaactggagacaatgcgatccctttggatgtcgtcgtgctccata
agctttggggcttgcagattactggcacagagaatgccaaggctaaatgtagaggttatc
gatgagaggcaggaaggatcactagaatctaggcctaatgactgcccagttgagaagctc
tacatatacaggacagttgctggtcctagatctgacatgccggcttgtgtttggacggta
tag
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