Dendrobium catenatum: 110097721
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Entry
110097721 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110097721
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110097721
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
90S particles
Helicases
110097721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
KARI_N
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
110097721
NCBI-ProteinID:
XP_020679919
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MEKTPSLLFAGTHFDRKRFAKDIARFKAKEEQEDRYEPEYKESQLTEMVGSKKEKKRKRN
DSEVVEGFNVFKSSKSLKTRDITTTMIDDSALHRKEIEKQIERDSLFRKKHGIHIFGYAV
PSPLRNFDELKSRFGCKSHLLRNFFELKFKEPTPIQRQAIPILLSGRECFACAPTGSGKT
LAFLIPMLMKIKPGHKEGVKGLIICPTRELAAQTTRECKKVAKGKKFHIKLMTKELSRCG
DFQKIPCEILVSTPLRVDFAVRKRKLDLSRVEYLVLDESDKLFELGFVEQIDSVVKACSN
PSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASALVKQKLLFAGSEKGKLLALR
LSFAESFNPPVLVFVQTKERAKELYKELAFDDIKADVIHADLTQEQRDDAVDDFRAGKTW
VLIATDIIARGMDFKGINCVINYDFPESASAYIHRIGRSGRAGRAGEAVTLFTEEDKPFL
RNIANVMKDSGCEVPAWILSLPKLKRKKHRPKRDSVGAEPDDTEE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagaagacgccgtcgcttctctttgccggcactcattttgatcgaaaacggtttgct
aaagacatcgctagattcaaggcaaaggaggagcaagaggatcgttatgagcctgaatac
aaggaatcccagttgactgagatggttggaagcaagaaagagaagaagaggaagcggaat
gactcagaagttgtggaggggtttaatgtttttaagagctccaagtctctcaaaacccga
gatataacaacaactatgattgatgattctgcgcttcatagaaaggaaattgagaagcag
atcgagagagattcacttttccgtaagaaacatgggattcacatttttgggtatgctgtt
ccatctccactccggaactttgatgaattgaaatcaaggtttggctgcaaatcacattta
ttgcgtaatttttttgaactgaagttcaaagagccaacacctattcaaaggcaagccatt
ccaattttactttcgggacgtgagtgttttgcttgtgcaccaactggatcaggcaaaact
ttggcttttctgatccccatgcttatgaaaattaagccaggacataaagaaggtgttaaa
ggtttaattatctgtcctacaagagaattagctgcacaaactaccagagagtgtaagaag
gtggctaaaggtaaaaagtttcacatcaaacttatgacgaaggagctgtccagatgcgga
gattttcaaaaaataccctgtgaaattcttgtatcaactccactccgtgttgattttgct
gtgcgcaagaggaagcttgatctaagtagggtggaatatctcgtcttagatgaatcggat
aaactatttgagcttggttttgttgagcaaatagattccgtagttaaagcttgttcaaat
ccttcaataattcgatctttgttcagtgcaaccttgccagactcagtagaggaacttgca
cgtacaataatgcatgatgcagtcagagttattgtgggaagaaaaaattctgcttcagca
ttagttaagcaaaagctgttatttgctggaagtgaaaaaggaaaacttcttgctcttcgt
ttaagttttgcagagagctttaatcctccagttttagtatttgtccaaacaaaagaaaga
gcaaaggagctttacaaggaattggcatttgatgacataaaggctgacgttattcatgca
gatctaactcaagagcagagagatgatgcagttgatgattttagagctggaaagacttgg
gttttaatagcaactgatatcattgctcgtggaatggattttaagggtattaattgtgtc
atcaactatgattttcctgaatcagcttctgcttatattcatcgaattggtcggtcagga
agagcagggagagctggtgaggctgtgacactgttcactgaagaagataaaccatttcta
aggaacatagctaatgtgatgaaggattcaggctgtgaggttcctgcttggatcctatcc
ctgcctaagctcaagaggaagaagcacagaccgaagagagattctgtaggagccgagcct
gatgacactgaagaataa
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