Dendrobium catenatum: 110097997
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Entry
110097997 CDS
T05027
Name
(RefSeq) THO complex subunit 4C-like
KO
K12881
THO complex subunit 4
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
dct03015
mRNA surveillance pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110097997
09122 Translation
03013 Nucleocytoplasmic transport
110097997
03015 mRNA surveillance pathway
110097997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110097997
03041 Spliceosome [BR:
dct03041
]
110097997
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110097997
TREX complex
110097997
Spliceosome [BR:
dct03041
]
Complex C
Other components
EJC/TREX
110097997
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110097997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_9
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
110097997
NCBI-ProteinID:
XP_020680348
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MAATGITGAESGTKLYISNLDYGVSNGDIKELFSEVGDLKRCTVHYDRNGHSSGSAEVIY
VRRSDAIAAVKRYNNVQLDGKPMKIEIIGDNLGLRVAPRVNVVGGANGRGKRTVVMTPEF
GQAAAGSFNRGSGRNHGRTLGRGGLRGQGMSTVRGRNLRGRGRRNDRGRGRNQPSKKMTE
DLDRDLETYHAEAMNTS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgggatcaccggtgctgaaagtggaacaaaattgtacatatcaaacttg
gattatggtgtttccaatggagatataaaggaacttttttctgaggttggtgatctaaag
aggtgtacagttcattatgatagaaatggccattcgagtgggtctgcggaagtaatttat
gtaaggagaagtgatgccatagctgctgtaaaacgttataacaacgttcagcttgatggt
aagccaatgaagatagaaattattggagacaatttgggccttcgggttgcacctcgtgtt
aatgtagttggaggcgctaatggcagaggaaaaaggacagtagttatgacgccagagttt
ggtcaagctgctgcggggtccttcaatcgagggtcgggccggaatcatggacgcactctg
ggtcgtggaggcctcaggggccaaggcatgagcactgtccgtggtcgcaacttacgtggc
cgtggacgccgcaatgaccgtggtcgtggtcgcaaccaaccaagtaagaaaatgacagaa
gatttagacagagatctcgaaacataccacgcggaagccatgaatacatcataa
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