Dendrobium catenatum: 110098611
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Entry
110098611 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110098611
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110098611
Membrane trafficking [BR:
dct04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110098611
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
RVT_1
VPS13_M
Motif
Other DBs
NCBI-GeneID:
110098611
NCBI-ProteinID:
XP_028554163
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MGSLGSRTLGNPSVSYQDRHKQQRNWDYGIEIDVPNFEATCRKNNPPRNNLIEKDENSEE
EVNEIESENDNEIERVDVEGDEGGEFLGLIQESLSSCAVSVLLTPKEDETWRILRPGDEW
KTAFKTKEGLYEWLVMPFGLSNTPSTFMRTMNHVLKPLIGKFVVIYFDDILIYSIHPYEH
LNHVKQVLQILREQKLFINLKKCSFMTASLMFLGFIVSAEGIKVDPIKIEAIQNWPIPKN
ISEVRGFHGLASFYRRFIKNFSSLIAHITDCLKKGIFRWTPQAEKTFEIIKTKMSQAPIL
SLPNFDIIFEVDCDASHIGIGAVLSQEGKPVAYFNEKLNESRYKYSTYDLEFYTIVQALK
FWRCYLIQREFVLNTDHEALHFLDSQKNLNKRHVKWVSFLQGYAFHIKHKTGVLNKVADA
LSRRFHLLITVYPTVTSFEFLKETYASDPDFKDIWEVASGTDPSGQYIIHQGFLFKGSRL
CISKNYLREQLVHELHSGGLSGHSGQGKTIAMALESVNTFIIEFRDGDEKNSWFKELVQA
TYRASAPPTINILGEQINSMTETITVRHGIVGLADLVICGALVETKLSIYGKYDGNCVSS
EELILELLGGGGKVNLFRSSSNLTIKTKLHSLKIVDELQGQLSAQPQYLAQSVVKQKPVS
GVDTEVQKSFLEEDDCFIDALSDFMSTPDQTFHNSLFTLDSFDQYSGCSFDSGLSLRNVK
ERSGEVFYEAWDTNISDFVVVTFVSRSPDSTLYDGIDTQMNIRMSALEFFCNRPTLFTLI
EFGFRLSQVNSAAAINENNTNSVDAERKEEDGGCALVKGLLGYGKGRVVFNLVMDVDSVC
IFLNKEDGSQLAKFVQESFILNLKFHPSSTTIEGTLGNMRLCDMSLGPDHRWGWLCDIRN
QAVESLIKFNFQSYSIEDDDYEGYDYSLSGRLSAVRIIFLYRFVLEISSYFMGLATPHTE
EVIKLVDKVGGIEWLIQKYEMDGATALKLDLSLDTPIIVVPKNSLSEDFMQLDLGQLQVK
NNFFWFGSKDKDPSAVHLDILDAEIHGVNLSVGVNGLLGKPMIREGQALHIQVRRSLRDV
FRKVPTLSIEVQVGLLHCVMSDKEYDVIINCLYTNLSEEPRLPSSFHSNVAGAKESMRML
VDKVNHNGQSLLSRSIVIITVEIHNALLELCNGLDVESPLAQISLEGLWVSYRSTSFFEM
DLYVTIPIFSVLDIRSDTKPEMCLMLGSYTDVSKPGCNNSSSSSNFINSQANMPSKLENE
SDMEVSKLTMLILDFRWRPSFRSFVIRIQQPRVLVVLDFLLAVAEFFVPSFGAITGREET
FHPNKDPLTSSDDIIFLEPVFMQRDDVVHLSPRRQLIVDGSHVNEFTYDGCGKILSLNDE
FESKGQPYSGAIIVLGRGKKLRFKNVKIENGALLRKCTHLSNDSSYSISEDDGVEISFLE
KDAFQSNGEGSKPCHESLRDTNTFDVELTSVANQSQNFTFEAQVVSPEFTFYDSSKLALD
NPLHLEKLLRARLDLRFMYASKENDTWARALVKDFTIESGAGLLILEPMDVSGGYTSVKD
KTSISMLSSDICIHLSLSVASLLLKLQNQAFEAVQCGKVNPLVSCTNFKRIWISPKGALP
GYNLTFWRPQAPSNYAILGDCVTSR
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgctaggttcgcgaacacttggaaatccaagtgtttcctatcaagatcgtcat
aagcaacaaagaaattgggattatggaattgaaattgatgttcctaactttgaggccact
tgtaggaaaaataatccaccaagaaataatctcattgaaaaagatgaaaattcagaagaa
gaagtgaatgaaattgaatctgaaaatgacaatgaaatagaaagagttgatgttgaagga
gatgaaggtggagagtttttgggtttgattcaagaaagtttgagttcttgtgctgtgtct
gttttactaactccaaaagaagatgaaacttggaggatactgaggcctggtgatgaatgg
aaaactgcttttaaaactaaagagggtttgtatgagtggcttgtgatgccttttggtctt
tcaaatactccgagtacttttatgagaactatgaatcatgttttgaaacctctcattgga
aagtttgttgtgatttatttcgatgacattttgatttatagcattcatccttatgaacac
ttaaatcatgtgaaacaagtgttgcaaatcttaagagaacaaaagcttttcatcaacctt
aagaaatgttctttcatgactgcgagtttgatgtttttgggctttattgtttctgctgaa
gggataaaagtggatccgattaaaatagaagcaattcaaaactggcctattcctaaaaat
ataagcgaagtaagaggatttcatggtttggcttctttctataggagatttataaaaaat
tttagttctctgattgctcatattactgattgtttgaaaaaggggatttttaggtggaca
cctcaagctgaaaaaacttttgaaattattaaaacaaaaatgagtcaagctcccattctt
agcttgccaaattttgacatcatttttgaagttgattgcgatgcctctcatattggtatt
ggtgccgtgcttagtcaagaaggaaaacctgttgcttactttaatgagaaactgaatgaa
tctagatataagtattctacttatgatttagagttctatactattgtgcaagctttaaaa
ttctggaggtgttacttgattcaaagagaatttgttttaaatactgatcatgaagcactt
cattttctggactctcaaaaaaatttgaataaaaggcatgtcaagtgggtttcatttttg
caaggatacgcttttcatatcaaacataaaactggtgttttgaataaagttgctgatgct
ttaagtcggaggtttcacttgttaataactgtttatccgactgttacttcttttgagttt
ttgaaagaaacttatgcaagtgatcctgactttaaagatatttgggaagtagcttcggga
actgatccatctggtcaatacattattcatcaagggtttttgtttaaaggttctagactt
tgcatttcaaaaaattatttaagagaacagttagtgcatgaacttcatagtgggggtttg
agtggacattctggtcaggggaaaactattgctatggcattagaatctgtaaacacattc
attattgaatttcgagatggtgatgagaagaattcttggtttaaagagctcgtgcaagcg
acatacagagcttcggctccaccaacaattaatatactaggagagcaaatcaatagcatg
acagaaactattacagtccgacatggtatcgtggggcttgctgacctcgtaatttgtggt
gctcttgttgaaacaaaattgtcaatatatggaaaatatgatggaaattgtgtaagttca
gaagaattgattttagaactactcgggggtggaggaaaggttaatctttttagatcaagt
tctaacctaactatcaaaacaaagcttcattcactaaaaattgtggacgagcttcaaggt
caactttctgcacagcctcagtatttagcgcagtctgtggtgaagcaaaagcctgtttct
ggggtagataccgaggtgcagaagtcttttttagaagaggatgattgttttatagatgca
ctgtcggatttcatgagcactcctgatcaaacatttcataattcattatttactcttgat
tccttcgatcagtactctgggtgtagttttgatagtggtttgagtctcaggaatgtaaaa
gagaggagcggtgaggttttctatgaggcatgggatactaatatttctgattttgtggtt
gtcacatttgtttcgagaagcccggattcaactctctatgatggtattgatacgcagatg
aatatccggatgtcagcattggagttcttttgcaacagacctactctttttactttgatt
gaatttggctttagactcagtcaggttaattcagctgcagcaatcaatgaaaataataca
aatagtgttgacgcagagagaaaagaggaagatggtggttgtgctttggttaaaggtttg
cttgggtatggaaaaggacgtgtagtttttaatttggtgatggatgtcgatagtgtatgc
atttttcttaacaaggaagatggctctcaacttgcaaagtttgttcaagaaagttttatt
ttgaacttaaagtttcatccaagttctactactatagaaggtactcttggaaacatgagg
ctttgtgatatgtctcttggaccagatcaccgttggggctggctatgtgatatacgtaac
caagcagttgaatctttaatcaagttcaactttcagtcttacagtatcgaagatgatgac
tatgagggatatgattatagcttgagtggtcggctttcagctgttcggataatatttctt
tacaggtttgttttggagatctcttcttactttatggggctagccaccccacacactgaa
gaagtgatcaagttggtggacaaagttggaggcatcgagtggctgattcagaaatatgaa
atggatggtgctactgctttaaaattagatctgtcattggacactccaatcattgttgtt
ccaaagaattctctgagtgaggattttatgcagcttgatcttgggcaactgcaagtgaaa
aacaatttcttctggtttggtagcaaagataaagatccatcagctgtacatctagatatt
cttgatgctgagatacatggtgtcaacctgtctgttggtgtaaatggtctattggggaag
cctatgatacgggaaggacaagcccttcatatacaagtgcgtcgcagcttaagagatgtt
ttccgcaaagttccgactctctctattgaagttcaggtgggcttgttgcattgcgttatg
tctgacaaggaatatgacgtaataattaattgtttgtacacgaacttatctgaagagcca
agacttccttcaagttttcatagcaatgttgctggagcaaaggagtctatgcgtatgctt
gttgacaaggtcaatcataatggtcagagcttactttcgcgatctattgtcatcattact
gttgagattcataatgctttgctagagctttgcaatggtcttgatgtagaatccccattg
gctcaaatctctttggaaggcctttgggtttcttatcggtctacatctttttttgagatg
gatctttatgtgacaattcctatattctctgtgctggatatacgctctgatacaaagcca
gaaatgtgtttgatgcttggttcttatacagatgtttcaaaacctggttgtaacaattca
agttcatcttcaaacttcattaactctcaagcaaacatgcccagcaagttagaaaacgag
tctgacatggaggtttctaagttgaccatgctgattttggactttcgatggcgtccttct
tttcggtcctttgttataagaattcagcagccacgggttcttgttgttttggattttctt
cttgcagttgctgagttttttgtcccctcttttggggcgataactggcagggaggaaact
tttcatccaaataaggatccgcttacttcctctgatgatataattttcttagaaccagta
tttatgcaacgtgatgatgttgttcatctttccccgagaagacagttgattgtggatggt
tctcatgtcaatgagtttacatatgatggttgtggaaaaatattatcattgaatgatgaa
tttgagtcaaagggacaaccatattcaggagcgattattgttcttgggagaggcaagaag
ttgcgtttcaagaatgtaaaaatcgagaatggtgctttattgagaaagtgtacacacctg
agcaatgatagcagctactcaatctctgaagatgatggtgttgagatttctttcctggaa
aaggatgcttttcaaagtaatggagaaggatcaaaaccatgtcacgagagcttaagggat
acaaatacttttgatgttgaattaacaagtgtagctaatcaaagtcagaacttcacattt
gaagctcaggttgtctccccggaatttactttttatgatagttcaaagttggctttagat
aatcccttgcatcttgagaagcttttacgggcaagattggacttgagattcatgtatgct
tcaaaagaaaatgacacatgggctcgagctctagtgaaggattttaccattgaatctgga
gctggccttcttattcttgagccaatggatgtctctggaggatatacttctgtcaaggac
aaaaccagtatatcaatgttgtcaagtgatatatgcatccacctatcacttagtgtagcc
tcactcttacttaagctgcaaaatcaggcttttgaagcggtacaatgtggcaaagttaac
cccttggtctcatgtacgaacttcaagcggatctggatttcaccaaaaggtgccttgcct
ggatataacctgacattttggaggccacaagctccgtcaaattatgccattttaggtgac
tgtgtgacatcaaggtaa
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integrated database retrieval system
