Dendrobium catenatum: 110098636
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Entry
110098636 CDS
T05027
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110098636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110098636
03036 Chromosome and associated proteins [BR:
dct03036
]
110098636
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110098636
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110098636
PBAF complex
110098636
GBAF(ncBAF) complex
110098636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
110098636
NCBI-ProteinID:
XP_020681181
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MSPASPSLPSSDSQLNWRKRKRECNLKRQQKPRIGEEEEEEHVAAVANDDEADDDYRYSP
ASDRNTDSAVLLRQSEVFSDGAQRISDFPAVVRRTIRRPHPSVVSIVDAERQHFSGPSAG
NEGAVGLPFLENISHGQLQSLSSVLPDHPSLQPPDVDKPSSYVCTPPPLMEGKGLMKPFG
TNQIIFLPMHSDWFSLSTVHRLERQVIPHFFSGKSAEHTAEKYVALRNKIIAKYMENPGR
RLSYADCQGLVANNELYDLSRIVRFLDHWGIINYLSSSSVHRGLRMAGSLLKEDANGELI
VHTSPLRSIDSLILFDRPKCSLRLDDIALLSTSSSSKDSAFHLGDLDVRIRERLSEHSCS
YCSRPLPNFFYQSQKEVETILCSECFNDAKFITGHSSLDFVRMNSKKDLTDVDGDIWTDQ
ETLLLLEAVEKFNDNWNEIAEHVITKSKAQCILHFLRLPMEADLLENIEVPQVEISPVSL
EVQNGGFSCSNPSNNTETSELNSEDQFPFASSQNPVMSLVAFLASAVGPRVAATCASAAL
SVLTKEDPRLSSQSVRVEVGSLGVSPINADENIKDKATNIKSDATSLSSEHIKKAAKCGL
SAAAIKAKLFADQEEREVQRLAANIINHQLKRTELKLKQFAEVETLLLKECEPAERMRQR
LSAERARMMSACFAPAASVGGALSASTGHVNPITPALPAASGQVSLSPYGNNMPHPHIQY
MQRQQMFSLAPRLPLSALHLSSSPSSQNVMFNSGVANTSNHQPLMRSSSGNNSSLG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgcatctccttctctcccatcttctgattctcagcttaactggaggaagcgg
aaacgggagtgcaacctgaagcgccagcagaagccccgcattggtgaggaggaagaggaa
gaacatgtggctgcagtggctaacgatgatgaggcggatgacgactaccggtactccccc
gcttcagaccggaacactgacagtgctgtactcctgcgtcaaagcgaggtcttctccgac
ggcgcccagcggatcagcgactttcctgctgtcgtgcgccgcactatccgccggccccat
ccatctgttgtctccattgtggatgcggaacggcaacatttctccggcccctcagctggc
aacgagggtgcggttggccttcctttccttgagaatatctcccacggtcagctgcagtcc
ctctcttctgtcctccccgaccacccctctcttcagccaccggacgttgacaagccctcg
tcatatgtttgcacgcctcctcctctcatggaaggaaaaggtctcatgaagccattcggg
accaatcaaatcatttttcttccaatgcactctgattggttttctctaagcacggttcac
cggctagagaggcaagtgataccgcacttcttctctgggaagtctgcagaacacacggca
gagaagtacgttgctttaagaaacaagataattgcgaagtatatggagaatcctggccgg
aggctttcgtatgcagattgccaggggcttgtagctaacaacgagctatatgatctcagc
cggattgtgaggttcctggaccattgggggataatcaattatctctcttcttcatcagtt
catcgtgggcttaggatggctggttcacttcttaaggaggatgctaatggagagctcatt
gtacacacctcaccattgagatccattgatagcttgattttgtttgataggcctaaatgt
agtctcagactagatgatatagcccttttgtcaacgtcttcatcttctaaggattcagct
tttcatttgggtgatttggatgttagaattagagaaagattatctgagcattcatgcagc
tactgctcccggccactgcctaattttttctaccaatcccaaaaggaggttgagacaatc
ctatgctcagaatgttttaatgatgcaaaatttatcactggtcactcaagcttagatttt
gtgagaatgaactccaagaaagatttgactgatgtagatggggatatttggacagatcag
gaaactttgttgctgcttgaggccgtagagaaatttaatgacaattggaatgaaattgct
gagcatgtcattactaagtcaaaagcacaatgcattcttcattttcttcgtcttccaatg
gaggctgacttgcttgaaaatattgaagtaccacaagtggaaatttcacctgtttccttg
gaggtacaaaatggtggattctcctgttcaaatcccagtaataacaccgaaacttcagag
cttaattcagaagatcaatttccctttgctagctcgcagaaccctgtcatgtccctggtt
gcatttttggcctctgcagttggacctagagttgctgctacctgcgctagtgcagcatta
tcggtccttactaaagaagatcccaggctgagttcacaaagcgtgcgtgttgaagttggt
tccttgggagtgtctcctataaatgcagatgaaaatatcaaagataaagccacaaatatt
aaaagtgatgcaacttctctctcttcggagcatataaagaaagccgcaaagtgtggcctt
tctgctgctgcaatcaaggcaaaactttttgcagaccaagaggaacgtgaggttcaaagg
ctggctgcaaatattatcaatcaccagttaaagagaacggagttgaagctgaagcagttt
gcagaggtggaaacattgttgttgaaggaatgcgaaccggcggagaggatgaggcaaagg
ctttcagccgagcgcgcacggatgatgtccgcatgctttgcaccagctgcatcagtagga
ggtgctctgtcagcttccactgggcatgtaaacccaataacaccggcgctgccggccgcc
agcgggcaggtgagtctctcaccttatggaaacaatatgcctcatcctcacatacaatac
atgcaaaggcagcaaatgttctcgcttgcgccgcggctaccactctctgctctccatcta
tcctcatcaccatcttctcaaaacgtgatgttcaattccggtgtggctaacacatccaat
catcagccattaatgagatcatcttctggtaataattcaagcttgggttga
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