Dendrobium catenatum: 110098711
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Entry
110098711 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110098711 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110098711
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110098711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
110098711
NCBI-ProteinID:
XP_020681277
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MWKEEGEPMQEDRAEEFTTMDHVDSIEDRVKSLLESSEANFNAWVLLVADVENTSPDDIQ
KICFVYDSFLSEFPLCYGYWTRYAGHKARICTLNEVDELYERAVKIASYSVHLWLSYCNF
AISSFEDPSDVRRLFQRGLSYVDKDYLCHLLWDKYIEFEYCQKQWDRLAHIYINTLRFPT
RRLQSYYESFKKLVALLEEQMGSQNAISTPPEAVPDCEMTHVKGCGYSEISDAVDLLSQC
LADPEDLKKYLSIGELLHHKSSQLDKSISCFEAHIQRQYFHVKPLDEFQLENWHEYLTFV
EEQGNFDWTVKLYERCLIPCANYLEFWIRYVDFVDANGGREIANDALERALKVFLKRIPA
FHQYYSMYKEKIGDKVNACAPFLQSSEGCTTVAIEYVSRRANMEKRLGNIEAAQEIYDKA
IKMAHEKHNLKILPLLYVNFARFTFVVTHSVEAAKEVFIKGIQQNPCKLIIEAFIDFMTM
HGGTSQLDSVDCKMAALLSPDSDVSQALSFQDREEISQLYLKQFVDLYGTIDETRLAWER
HRKLFPHIMRPSSIFDYSSHGFQIQSKKTEGRKGTQTNSPNHSSENPSKKVLIKHAFENH
SPVNMPIILPEETLNCDLKSYGKADNDKESQESIAAEANHIHEPSFPGGSIIDVINEIVQ
ESQNVAQIPDASSEYHETEMPAQSYMQNGNLEPPALDNLSIGSTDYATRQTNTVTSHDNN
APQEETSKEDGNKFEGDGDDGEVSIIHSSGEKILKSDSDGLEKLQEYSSHSHPTNHATRP
RIKTEEQLKFEAKIDTIQALPVNAEYPQIASGGGQWAQLCYGVQGVADPNSILCGNIQPS
NPQQSQMQNQSGGTNQEVYLTQSHVSLNPSLPNSQDPQANHTQLQYQLAASQAYTNPGLA
FFGQHMQQPAVLYAPDQQVQHASSQTQTHAYQNVSQSDERYGYYQSFQGYEPHMWQYYQN
LYYLQQQQLQQRQQGQQMNDSHKQQLTDHSKATSSQQESLENLEERVQLQVHTDTQQHNR
NLDEKLNASTKQQNQQEKQEESTQPYQQSTLVMNSEQYQLLYLQQQQHFYLQQQQHHQMY
MQQQQQQQQQQQLLLFQQQQLLQLQHQPMQLQQQQQSPYPQQDYQLQHQTNAVELKAVES
NVYAQGKGDPLQSAAGQSANSHSIKQSVNSPNG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggaagagggagagccgatgcaggaggatcgagccgaggaatttacaactatg
gatcacgtggactccattgaagatagagttaaatcattattagaaagttctgaagctaac
ttcaatgcttgggtgctgcttgtagcagatgttgagaatacttcaccagacgacatacaa
aagatctgctttgtctatgattcctttttgtcagagtttccattatgttatggatattgg
acaagatatgcggggcacaaggcacgcatttgcacattgaatgaggtggatgaactctat
gaacgggcagtgaagattgcttcatactctgttcatctctggctcagctattgtaacttt
gctatatcatcatttgaggatccttctgatgttagacgactttttcagagaggtttatct
tatgttgataaggactatttgtgccatctgctatgggataaatatatcgaatttgagtat
tgtcaaaagcagtgggatcgactagctcatatttatattaacactttgaggtttcctacg
agaaggttgcaaagctattatgaaagctttaagaaattggttgctctgttggaagaacag
atgggatcccaaaatgcaatatccaccccaccagaagctgttcctgactgtgaaatgaca
catgtgaagggctgtgggtattcggaaatctcagatgctgtggatcttcttagtcaatgc
cttgctgatcctgaagatttgaagaaatatttatcgattggtgagctattgcaccataaa
tctagtcaattagataaaagtataagctgctttgaggctcatatccagagacaatatttt
catgtcaagccacttgatgagttccagcttgagaattggcatgaatatcttactttcgtt
gaggagcaaggaaattttgattggactgttaaactttatgagagatgtttaattccttgt
gctaattacctagagttctggattcgttatgtggattttgtggatgctaacggtggtaga
gagatagctaatgatgcacttgaaagagcattgaaggtcttcttaaagagaattccggcc
ttccatcaatactattctatgtataaagaaaaaattggtgataaagtaaatgcctgtgct
ccttttctacaaagtagtgaaggttgtacaactgttgctattgaatatgtcagcagaaga
gcaaacatggaaaagcggctgggaaatattgaagcagctcaggagatatatgataaagcc
atcaaaatggcccatgagaagcataacttgaagatacttcctcttttgtatgttaatttt
gcacgatttacatttgtggttactcacagtgtagaggctgccaaggaagttttcatcaaa
ggtatccaacaaaatccatgcaaattaattatagaggcttttatagactttatgaccatg
catggagggacgagccagttagattccgtagattgtaaaatggccgctttattatcaccc
gattcagatgtttctcaagctttaagctttcaggatcgtgaagaaatctcacaactatat
ctaaagcagtttgttgacctctatggaactatcgatgaaacaaggctggcatgggaacgc
cacagaaaactattcccacatattatgagaccatcttctatatttgattattcttctcat
ggtttccaaatccaaagtaagaaaactgaaggacggaaaggcacgcaaactaattctcct
aatcattccagtgaaaatcccagcaaaaaagtcttgattaaacacgcttttgaaaatcat
tctccagtaaatatgcctatcattcttcctgaggagactctgaactgtgacctgaaatca
tatggcaaagcagacaatgataaggaaagtcaggaatctatagcagctgaagcaaatcat
attcatgaaccgtcatttcctggagggtctattatagatgtcataaatgagattgttcaa
gagtctcaaaatgtagctcaaattccagatgcttcatcagaataccatgaaactgaaatg
cctgctcaaagctacatgcaaaacgggaatttagaacctcctgcacttgataacctttca
attggctctacggattatgcaactcggcaaaccaacacagttacttcccatgataataat
gctcctcaggaagaaacatctaaggaagatggaaacaaatttgagggtgatggtgatgat
ggtgaggtttcaataatacattcgtctggtgagaaaattttgaaatctgactccgatggt
ctagaaaaacttcaagagtatagcagtcattctcatccaactaatcatgcaactaggcca
agaattaaaacagaggaacagctaaaatttgaagcaaagatagatacaattcaagcgtta
cctgtcaatgctgaataccctcaaattgcttctggtggaggacagtgggctcagctttgt
tatggtgtgcaaggtgtcgctgatccaaattccattctttgtggcaatattcaaccttcc
aaccctcaacaatcacagatgcaaaaccagtcaggtggaactaaccaagaggtgtattta
actcagagccatgtatctctgaatccgtctttaccaaactcccaagatccccaggctaac
catacccaacttcagtatcagctagctgcctctcaagcttacacaaatccaggccttgct
ttttttggacagcacatgcagcaaccggctgttttatatgcaccagatcagcaagtccaa
cacgcttcttctcaaactcagactcacgcatatcaaaatgtctctcaaagtgatgaacga
tatggttattaccaaagttttcaaggatatgagcctcacatgtggcagtattatcagaat
ttatattatcttcagcagcaacagctgcaacaaaggcagcaaggtcaacaaatgaacgat
tctcacaagcaacaattaactgatcactcaaaggcaacaagctctcagcaagagtcgctt
gagaacctggaagagcgggttcagttgcaagtacatacagatacccagcaacacaataga
aaccttgatgaaaaactgaatgcctcaacaaaacaacaaaatcaacaagagaagcaggaa
gaatcaacccaaccttaccagcagagtacgctggtgatgaattctgaacaataccagctc
ttatatcttcaacagcaacaacatttttaccttcagcaacagcaacaccaccaaatgtac
atgcaacagcagcagcaacagcaacagcaacagcagctcttacttttccaacagcaacaa
cttctccagcttcagcatcagccaatgcaacttcaacagcagcagcaatcgccatatccg
caacaagactatcagctgcagcatcaaaccaatgcagtggaactgaaggctgtagagagc
aatgtttacgcccagggtaaaggagatccacttcaaagtgctgctggacaatcggcaaat
tctcattccatcaaacagtctgtgaattcaccaaacggttaa
DBGET
integrated database retrieval system
