Dendrobium catenatum: 110098814
Help
Entry
110098814 CDS
T05027
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110098814
09123 Folding, sorting and degradation
03018 RNA degradation
110098814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110098814
03041 Spliceosome [BR:
dct03041
]
110098814
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110098814
mRNA cycle factors
Stress granule specific factors
110098814
Spliceosome [BR:
dct03041
]
Complex C
Other components
Complex C specific factors
110098814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_10
RRM_3
CitG
Motif
Other DBs
NCBI-GeneID:
110098814
NCBI-ProteinID:
XP_028557027
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MATDTTPTAVAVSPVPALYIGDLHQDVTDPNLFELFSTIGDIASVRVCRDSVSGCSLGYG
YVNYMSEQDAENAIEKLNYSVLCGKPIRIMWSHKDPVARNSGVGNIFVKNLSGSIDNLKL
QAMFGKFGTILSSKVALQDGKSKGYGFVQFDSQDSANAAIENLNGTTVDGKKLFVNKFIK
KSERIPCNLEAKYTNLYMKNLDQDITEELIELKFSEYGKIFNVKIAKDEAGNSRGFGFVN
FENPEDAKKAVEAMNGLRLGSKKLYVARAQKKDERLQILQHTFEEKRNEQIRNNMASNLY
IKNIDDCVDDNALWEYFSQCGTVASAKVMHDEKGNSKGFGFVCYTTPEEASNAVNTLHGS
MFHGKPLYVAIAQRKEERAEQLRLQYAQRMNGLAGSATAVVPTVYPTLYYSPPGVMPQIS
ARQGIVYQPFGLRPGWRPSGFVPPSRPTFQPMPLPIIPNTPRQQRQNRGRMNGHFLPQSG
QSMPYMAPLQQPNHSLNYLKDNNSQEFVQNGRRWGMNNLPLGLSASSNPQGMEQLSSRLA
AAPLQQQKQMLGERLFPLVQKLKADLAAKITGMLLEMDNSELLLLLESPDALAAKVEEAV
QVLKLSKTQVSELIRK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggatacaacgccgactgcggtggcggtttcgccggttcccgcactgtacatc
ggggacctacaccaggatgtaactgatccgaaccttttcgagcttttctcaaccattggc
gatatcgcttctgttcgcgtctgccgggattccgtctccgggtgctcgcttggctacggt
tatgtcaattatatgtctgagcaggatgctgaaaatgctatcgagaaattaaactacagt
gttttgtgcgggaagcccattaggattatgtggtcacacaaggatccagttgctaggaac
agcggggttggaaatatatttgtgaagaacctaagtggatccattgacaatttgaaactt
caagctatgtttgggaaattcgggactatcttgtccagcaaagtggctttgcaggatgga
aagagcaaaggttatggctttgtccagtttgattcgcaagattctgcaaacgctgccata
gaaaatctgaacggtacaacagttgatggcaagaaactctttgtgaataagttcataaaa
aagagtgagcgaattccctgcaatcttgaagccaagtatacgaacctgtacatgaaaaac
ttggatcaggatataacagaagaacttattgaactaaagttttcagagtatggaaaaatc
tttaatgtgaagattgcaaaggatgaagcaggaaactcaagaggatttgggtttgtaaac
tttgaaaaccctgaggatgctaaaaaggcagtggaggcaatgaatggacttcggctggga
tcaaagaaactatatgttgcaagggcccaaaagaaggatgagcgactacaaattttgcag
catacgttcgaggaaaaacggaatgaacagattagaaataatatggcttcaaatctgtat
attaagaacattgatgattgtgttgatgacaatgctctgtgggagtatttcagtcaatgc
ggtactgttgcctcggcaaaagttatgcacgatgagaaaggaaacagtaaaggtttcggg
tttgtttgttatactactccagaggaggcttcaaatgcagtgaatactcttcatggaagc
atgttccatggaaaacctttatatgttgcaattgcccaaaggaaagaggaaagagcagaa
cagttgcgtcttcagtatgcccaaagaatgaatggtttggctggttcagcaaccgctgta
gtccctactgtttatcccacactttactacagccctccgggagttatgccacaaatttct
gcccgacaaggtattgtatatcaaccttttgggctgagaccaggatggcggccaagtgga
tttgttcccccatctaggccaacttttcagccaatgccgcttccaattattcctaatact
cctagacaacaaaggcaaaacaggggtcggatgaatggacattttctgcctcaatctggg
caatctatgccatacatggctccgttgcaacagcctaaccattctctgaattatttgaaa
gataataatagccaagagtttgtacaaaatggaaggcggtggggcatgaataatttgcct
cttggtctttctgcttcatctaatccacaagggatggagcagctcagtagcaggctcgct
gcagctccactacagcaacagaaacagatgctcggcgaacgcctattcccattggtccag
aaactcaaggcagatctggctgctaaaataacggggatgttgttggagatggataactcc
gaattgctattgctgttggagtcgcctgatgcacttgctgcaaaggtggaagaagctgtt
caagtattgaaactctccaaaactcaggtgagtgaactgattagaaaataa
DBGET
integrated database retrieval system
