Dendrobium catenatum: 110098887
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Entry
110098887 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110098887
KO
K14311
nuclear pore complex protein Nup188
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110098887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110098887
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110098887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
110098887
NCBI-ProteinID:
XP_020681493
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MSQSSGAIKGQALQLIHDGLEIKMLSVLKDLLSSGPFEKFLQDVELVGLWVDETIIEDNL
VLDFLFLAYYDNFCVCNAVQWMSLCSLFKDILGGAYNIENLAVSVESRASFSHAKAQLLF
ILIETLDLENLLRMVHDEVSISEGGFIFSMQDVQEMDFLVSTFSGLGTFEAGPLFLAWAV
FICLLSSLPDLKNESILMEIDHADYARQAFEVGTCNYLLEVLRSDCLRDSDGPVSGFLNI
LRTFVSAFIASYELNHQPEENILRLILEILREIFKGEESLSIQFWDRDSFVDGPIRSLLY
MLETEYPYHIIELLHLLSALCNGSWSSECVYNFLEKMNGMASLFESPCGSPLMDVYDFVY
AHQRIPVPGVEGLFISPGTRGQILKVIDVNIALVRWECAHSGVYLLVLRVAQMSHSNGHD
EVNLILSLLHRLVSSNAALCFNLLHLDESLYTKAARNNGLIEQNLCIDVVRFISSLTVHF
IEDGGHGSNIAICLNILAQMLQCAPSHVIDMVLSSNIFGTTYVVSPSDAWLLSGGLSEML
LVGHSEESGCFLLTASVLDLTVHLIEKGTGDTVVCALAVFSLRYFFVSHMHMMYKLKYGQ
WKVILKVLDVVRSCIKGARGCHKLGSMIRDILNLDSFILNSLCQLLYVSEQAMEKSSRTH
WYGLKETEDLQEVACSALDIFYYLLADLLKGTFIASPPFVQIILPSSSKTVSVFGATLSL
MSLFSNPAVQVAATKVLSMLCVIASRLQPYSLENVTLADAVQISDLTATICRILDEEPCK
RKDLLISLLDFLVSAACFQPSLLVSIISSHVAEESLGVNAGHVNNKLAQALLVNQINSGR
RSAIDSVLKYVNRSELLFNSDPRILMSTLNFLKSLWDGGVPYMDTLDKVRKSARFWEHLS
SVLAQRLNFDHPLNDLSVADIQHATYRYRCQGIVLEIMARELFSQEKEYKNEIYGTHDSN
NSSKGHAKNRLIFEASQSLINDILSNWNEGSIMDNLMKSYSLGGYDTRIVSHAKMAACIL
IVRLMLTLSDGSAECLSVPLIGRIRLIQDKLRQNPSFSALLEQYSFQGYSDGKKVSSLVL
HDLYYHLQGELEGRFIAPGHFQELSAFLLNFENFQCKESTNEKDLWSTDVMMYDISNIRA
ELGIDLWDKSEWKTAKEIGERMLSYMHTSNLMLSLADTKNFALKALISIMSFHHEKVLKS
KSTITSHGISDAFIERSIINICRCIQSTEDSLVPLLNPSEKLLELLTAQAEMLLVLSRIL
FMQHSLRNNKKQLFSVSISLIRTSGSCFKSLAMGRLSTKLNKAVKFFLMVLLMSMEFNNP
GESTNDDSGLDNNQLAETSLAIVGLLPVLCKYVERIECFDQSVASMDLMLRSFLMPDIWL
PILQENLPLKHLIQITRQRISLSSVTIALNFLLTLAQPKGGAEMLHSVNLFPSLQILFKH
LVDETKPNADVGCFSTNYGKNNMHAHLLCFTFAIISSVCHSLRDDSSFIDIFGSAIHNFF
ADKDNMISLCFTTPNFPSDVQSYKTIRNQDPQTSLASLKLSEHALLLICLLTRHRNYRRK
GMKEIEFEVRQKSIHFLAFISKETQHVGDLSNRMIPLFCLPTLKEEHELNEKPSFIGSKH
GWFVVSALAVSSKNKATSSLSTGLPLVTKDYVNGCAQAKPTYFSDVVAIQIYRITFLLLT
YLCMQAKAAAERAEEVGYIDLERFPDLPMPEILHGLQDQAIAVVVDVCEAKSSAIPVETE
GVCLLMLQILEKSLYLEFCVTQSCGIRPVLGRIEDVSKELKSLIQVVKQHKNLKSSLASL
RQILTLVYPGLMQTSNLL
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtcaagcggtgcaattaaagggcaggctctgcagttgattcatgatgggttg
gaaataaagatgttatcagtccttaaggatctgctttcatctggaccttttgaaaaattt
cttcaggatgttgaattggttggactttgggtggatgaaactattattgaagataacctg
gttttggattttttattcctggcttactatgataatttttgtgtctgcaatgctgtgcaa
tggatgagcttatgctcgttattcaaggatatactaggaggtgcctataacattgaaaac
ttggctgtttcagtcgaatcgagagcttcattttctcatgctaaagctcagctgcttttc
attcttattgaaactttagatctagaaaatcttcttcgcatggttcatgatgaagtgtct
atcagtgaaggtggttttatcttttccatgcaagatgttcaggaaatggattttctcgtt
tccaccttttctgggttgggaacgtttgaagctgggcctttgtttcttgcgtgggcagtt
ttcatctgtttgctatcgtcacttcccgatttaaaaaatgaaagcattctcatggaaatt
gaccatgctgattatgcccgtcaagcctttgaggttggaacatgcaactatttgctcgaa
gttcttcgtagtgattgtttgagggattcagatggtccagtttctggttttttgaacatt
ttgagaacattcgtctctgcatttatagcttcctatgaacttaatcatcagccagaagaa
aacatactgaggttgattttggaaatacttcgtgaaattttcaagggggaggaatccctt
tctattcaattctgggacagagatagttttgttgatggtccaattcgatctttgctctat
atgttggaaactgaatacccatatcacataattgaacttcttcatttactatcagctctt
tgcaatggttcctggtcttcagagtgtgtgtacaattttttagaaaaaatgaatggtatg
gcgtcattattcgagagcccttgtggttccccactcatggatgtttatgactttgtttat
gctcatcaaagaatccccgttcctggtgttgaaggcctttttatctcacctggaacccgt
ggtcagattttgaaggttatagacgtaaatattgcactagttcgttgggagtgtgcacat
tcaggagtttatcttttagttttgcgtgtagctcaaatgtctcattcaaatgggcatgat
gaagtaaaccttattcttagcctacttcataggctggtttcatctaatgcggctctgtgt
tttaatttattgcatttggatgaatccctgtataccaaagcagctcgaaataatgggctt
attgaacaaaatctttgcattgatgtagtgaggtttatcagctctttgactgttcatttt
attgaggatggtggacatggaagtaatattgcaatatgcctcaatattttggcgcaaatg
ttgcagtgtgcaccttctcacgtaattgatatggtgttgagttcaaatatatttggtaca
acatatgttgtgtcaccaagtgatgcatggctactatctggtggactttctgaaatgctt
ttagttggccattcggaggaaagtggatgctttttgttgacagcatcagtgcttgatcta
accgtccatcttattgagaaaggcacgggggatacagtagtttgtgcacttgctgtattt
tctctgcgatacttctttgttagccacatgcatatgatgtacaaactgaagtatgggcag
tggaaagtaattttgaaggttttagatgtggtgagaagttgtattaaaggtgccagaggc
tgtcacaagcttggctccatgatccgggacattttaaatttggactccttcattcttaat
agcttatgtcagcttttgtatgtatcagagcaagcaatggagaaatcaagtcgaacccac
tggtatggcttgaaggaaactgaagacttgcaagaggttgcctgctctgcattggacatt
ttctattatttgttggctgatctgttaaagggaacttttatagcttcaccaccctttgtt
caaataatacttccttcttcaagcaagactgtttcagttttcggtgccacattatcattg
atgagtttattttcaaatccagcagttcaagtggctgcaaccaaagttctttctatgctg
tgtgttatagcatcaagacttcaaccgtattcattagagaatgttacccttgctgatgct
gtgcagattagtgatttaactgctacgatctgccgcattttagatgaggaaccatgcaaa
agaaaggatttgctgatctctctactcgattttcttgtttctgctgcttgctttcagcca
tctctcctggtgtccataatttcatcacatgtagcggaagaaagcttaggagtaaatgct
gggcatgttaataacaagctcgctcaagcacttcttgtcaaccaaataaattctggaagg
agaagtgccattgattcagtcctgaaatatgtgaatagatctgaacttctttttaatagt
gatcctcgtatattgatgagcactcttaatttcttgaagtcgttatgggatggtggtgtt
ccgtatatggatactttagacaaagttagaaagtctgctaggttctgggagcacttatca
tctgtacttgcccaaagactaaactttgatcaccctctaaatgatctgagcgttgctgac
attcagcatgccacatataggtaccgttgtcagggaattgtcttagaaatcatggcacgg
gaacttttttcgcaggaaaaggaatataagaatgagatatatggaacacatgattcaaac
aatagctcaaaaggacatgctaaaaatagattgatctttgaagcttcgcaatctttgatt
aatgatatcttatcaaactggaatgaaggctccataatggacaatcttatgaaatcatat
tctttgggtggatatgatacaagaatcgtttctcatgctaagatggctgcttgtatatta
attgtgcgtctgatgcttacactgtcagatggtagtgcagaatgcctatcggtgccactg
attgggaggattcgcttgattcaagacaagttgaggcaaaatccttcgttttctgccctt
cttgaacaatactcgtttcaaggctatagtgatggaaagaaagtgagcagtctcgtgctc
catgatctttattaccatctacagggagagctggagggccgatttattgctccaggtcat
tttcaggagctctctgctttccttcttaattttgaaaatttccagtgtaaagaaagcact
aatgaaaaggatttgtggagcactgatgttatgatgtatgacatctcaaacataagggct
gagctaggaattgatttgtgggataaatcagagtggaagacagctaaagaaatcggagag
agaatgttgtcttacatgcatacatcaaatttgatgttatccttagcagacaccaagaat
tttgctctgaaagctttgatttctattatgtcattccatcatgaaaaggtgctcaaatca
aaatcgacaataactagccatggaatctccgatgcattcatagaacggagtattataaat
atttgcagatgcatacagtctacagaagattcgcttgttccacttctaaacccttctgag
aagctgttagaactgcttacagcacaagcagaaatgttgcttgttctctccagaatctta
ttcatgcaacattctctaagaaacaacaagaagcagctcttttctgtttcaataagtctg
ataagaacatctggctcatgtttcaagtcacttgctatgggcaggctgtctactaagctc
aacaaagcggttaaattctttctcatggtgcttctgatgtctatggaattcaataatcct
ggcgaatccacaaatgatgactctggtttagataacaatcagcttgctgaaacatctctc
gcaattgtgggactattacctgtactttgcaagtatgttgaacgcattgaatgtttcgat
caatcagttgcatcaatggacttgatgctcagaagttttttgatgcctgatatttggttg
ccaattctacaagagaatcttcctttgaaacatcttatccaaattacacgtcaaagaatc
tctctatcttcagttacaatagccttgaatttcttgttaactttggcacaaccaaaaggt
ggtgctgagatgcttcattcggtcaatcttttcccttccctgcagattttattcaaacat
ctggtggatgaaacgaaacctaatgctgatgtgggttgtttctccactaactatggcaaa
aataacatgcatgcacacctattgtgtttcacatttgcaataatctcctcagtatgtcat
tctctgcgtgatgattcttcttttattgatatttttggcagtgctattcacaacttcttt
gctgataaggacaatatgatttcactatgttttactacacctaactttccatctgatgtt
caaagttataagacaattcgaaatcaggatccacagacatcattggcatctctcaagctt
tctgagcatgctctgttgctcatttgtttgctgactagacatcgaaactataggaggaaa
ggcatgaaagaaatagaatttgaagtaaggcagaagagcattcattttctggcatttata
agcaaggaaacacagcatgttggagacctatctaatagaatgattcctcttttttgtttg
ccaactctaaaagaggagcatgagttaaatgagaagccctcttttattggcagtaaacat
ggatggtttgtggtttctgcccttgctgtatcatctaaaaataaagccaccagttcatta
agcacaggattgccacttgtaactaaggattatgtaaatggatgtgctcaagctaagcca
acatatttttctgatgtcgtggctatacaaatctataggataacatttcttcttctgaca
tatctgtgcatgcaagctaaagctgctgctgaaagggcggaggaggttggatatattgat
cttgaacgtttccctgatcttcccatgcctgagatattacatggcctacaggaccaagca
atcgctgttgttgtagatgtgtgtgaagcaaaaagttcagctattcctgtagaaactgag
ggtgtatgccttctaatgttacagatattggagaaatcattatatttggagttttgtgtg
acgcagtcatgtggtatcaggcctgtacttggacgtattgaggatgtttccaaagaactt
aaatccttgatacaagttgtcaagcagcataaaaatctcaaatcatcacttgcttcgctg
aggcagattctaacacttgtatacccgggactaatgcaaacgagcaatcttctgtaa
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integrated database retrieval system
