Dendrobium catenatum: 110099002
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Entry
110099002 CDS
T05027
Name
(RefSeq) DNA repair and recombination protein RAD54 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110099002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110099002
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
110099002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
110099002
NCBI-ProteinID:
XP_020681684
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MASGDEGSGGEEPCCSSDYGDDYEDDDNNEIEVEEKRLIDGEGDARAVSAASPPSDAERK
SCNVSALIRGNLVVRRQSLIPRVLSVADGAVVARKPFKPPCTDGYEDQNKLARRLFARKR
FVPWGSSRPPLVAIHNLLTSPPDIENETKEMDVPLPAGVEPLILWDNEGSGEPAQITVDP
SLVCYLRPHQREGVQFMFDCVSGLYSAEGISGCILADDMGLGKTLQSITLLYTLLGQGFD
GKPMVRKALIVTPTSLVSNWESEIDKWIGRKIQLISLCETSRADVLSGIDSFLRPSSTMQ
VLIISYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQTLTNRALAALPCTRRILLSGTPM
QNDLEEFFAMVNFTNPGILGNATYFRRYYEAPIISGREPLATMEERKLGLERSAELSAKV
NQFILRRTNALLSNHLPPKIVEVVCCKLTPLQIQLYKHFIQSKNIKRVIAEELKQSTILA
YITALKKLCNHPKLIYDSIKSGGSATSGFENCMQFFPSELFSGRSGSWTGGGGIWVELSG
KMHVLARLLAHLRQKTDDRIVLVSNYTQTLDLFAQLCCERRYPYLRLDGTTSIGKRQKLV
NRFNDPTKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV
YIYRFLSTGSIEEKVYQRQMAKEGLQKVIQQDLGESEMLHGNFLSAEDLRDLFRLHEDAK
SEIHENMNCARCNTNAQEVEDNNGYSDVRSKDSSGSCQVNQSADDIGGFAELAGCLHKLK
KSERQIGCPLEEDLNNWGHHSIPETLPDAILHAAAGDEVTFVFTNQVDGKLVPVESTVKT
AANQANDQVPIKAKHTEFNEKAGRNSPRASAVRTIVKGSSKFLRTSVNSLQSDRVQATSS
HFLCRKSSVSNSSHDFI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggagatgagggatccggcggcgaagagccctgctgtagctccgactatgga
gacgactatgaagacgacgacaacaatgaaatcgaggtggaagaaaaaaggctaatcgac
ggtgaaggcgatgcgagagcagtttccgcggcatctccaccgtctgatgctgaaaggaag
tcctgtaacgtttctgctctcattcggggaaatctcgttgttagaaggcaatcgcttatt
cctcgagttctctcggtagctgatggagccgtggtagctcgaaagccattcaaaccccca
tgcactgatggttatgaagatcagaacaaacttgcgcgacggctttttgcacggaaaagg
tttgtcccttggggttcatcaaggccaccattggttgctattcacaatctcttaacttct
ccacccgatattgagaatgagacgaaagaaatggatgttcctcttccagctggcgttgag
cctctgattttatgggacaatgaaggttcgggagaacctgctcagatcacggttgatcca
tcacttgtttgctatcttagacctcatcagagagaaggagttcagtttatgtttgactgt
gtttctgggttatatagcgctgaaggtatttcgggatgcattcttgctgatgacatgggg
ctgggaaagactctccaatctattacattgctttatacccttcttggtcagggctttgat
ggaaagcctatggttaggaaagctcttattgtcactcccacaagtcttgttagtaactgg
gaatctgagattgacaagtggattggaagaaaaattcagttaatttctctttgtgaaacc
tcaagggcagatgtcctatctgggatcgacagtttcttaaggcctagcagcactatgcaa
gtactcatcatatcctatgagacgtttagaatgcattcatcaaaatttgagaagaatgga
agctgtgatcttctaatatgtgatgaggctcaccgtttaaagaatgaccagacattaaca
aatcgggctttggctgctctaccttgtactcggagaatcttattgtcagggacacctatg
cagaatgatctagaagaattttttgctatggtcaatttcacaaatcctggtattttgggg
aatgcaacatacttccgccgctactatgaagcaccaattatttctggaagagagccattg
gccactatggaggaaaggaaattgggcttggagagatctgcagaacttagtgcaaaagtc
aatcagtttatattgagaaggacaaatgctttgttatcaaatcacttgccacctaagata
gtggaagtagtgtgttgcaagctcacccccttgcagattcaactgtacaagcatttcatt
caatcaaaaaatattaagcgcgtaattgctgaagaattaaagcaatccaccattttggcc
tatattacagcacttaaaaaactttgcaatcaccctaagctaatttatgattcaatcaaa
agtggagggtccgcaacatcaggatttgagaattgcatgcagtttttcccatctgaatta
ttttctggaaggtcgggatcatggactggtggtggaggaatatgggtagagttatcagga
aaaatgcatgtcttagctcggctgttggcccatcttcgtcagaaaactgatgacagaata
gttctcgtgtcaaattacactcagacactggatctttttgctcaattatgctgcgaaaga
aggtatccataccttaggcttgatggcacaacatctattggaaaaagacaaaagctggtt
aatcgtttcaatgatccaacaaagaatgagtttgtgtttcttttgagtagcaaggctggt
ggttgtggacttaatttgattggaggaaatcgcttggtactctttgatcctgattggaac
cctgccaatgataagcaggctgcagctagagtttggagggatggccagaaaaagagagta
tacatatataggtttttgagcacagggagcattgaagagaaggtgtaccagcggcagatg
gcaaaggaagggcttcaaaaagttattcagcaggatctaggtgaaagtgagatgttgcat
ggcaattttctttcagctgaagatttgcgggacctcttcaggcttcatgaagatgccaag
tctgagattcatgaaaacatgaactgtgctcgttgcaacactaatgctcaagaagtggaa
gacaacaacggttactcggatgttaggagtaaagattcaagtggaagctgtcaagtaaat
caatcggctgatgacattggtggatttgccgaacttgctggatgcttgcacaagttaaaa
aaatcggaaagacagattgggtgcccacttgaggaagacttaaataactggggtcatcac
tccatccctgaaactctgccagatgcgatactgcatgccgcggctggtgatgaggttacg
tttgtatttacaaaccaagtggatggtaaacttgttcctgtagaatcgacagtgaaaaca
gcagccaatcaagctaatgatcaggtgccaattaaagcaaagcataccgaattcaatgaa
aaagctggcagaaatagtcctcgagcatcggctgtacgtactattgtcaaaggatcttct
aaatttcttagaacatcagtaaactctttgcagtctgatagagtgcaagcaacgtcctct
cactttttatgcagaaagagttctgtttcaaactcatcacatgattttatttaa
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