Dendrobium catenatum: 110099110
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Entry
110099110 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110099110
03036 Chromosome and associated proteins [BR:
dct03036
]
110099110
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110099110
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110099110
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110099110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
110099110
NCBI-ProteinID:
XP_020681817
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MPALFLPDSPTEEVKTTKTKKLLKPDPMSPDLNGFAEEDKLSKKKKKHEKSKPEDGERKK
KRRKSVEEDESSNTSSDAVEPASIKKVAVNGSLSKKARVIEEEVEGDGELTGSGEEDGGD
ADPNALTNFRISKVLRERLNSKGIKALFQIQAMTFDMVFEGSDLVGRARTGQGKTLAFVL
PILESLINGMHKASRSTAYGRAPSVLVLLPTRELANQVHVDFEFYGGAVGLSSCCLYGGS
PYRSQELALRRGVDIVVGTPGRIKDHLERGTLDLKSLKFRVLDEADEMLNMGFVDDVELI
LGKVADANKVQTLLFSATLPDWVKKISARFLKPLKKTVDLVGNEKLKASASVRHLVLPCS
SAARPHIIPDLIRCYSRGGRTIIFTETKESASQLSGLLPGSRALHGDIMQTQREIILAGF
RSGKFLVLVATNVAARGLDINDVQLIVQCEPPRDVEAYIHRSGRTGRAGNSGVAILLYEP
RYSHSIFKIEKQSGVKFEHISAPEPSDIADMAGSEAVDAILSVSDSVVPVFRSQAEELLN
SSNLSAVELLAKALAKAAGYTTITKRSLLSSLDDYVTLHLVTEKQIYTPAFAFSILKRFM
PEEKIAGVKHLSITADCMGAVFDVPADDVDSFIEGQENASMVAIEVLKKLPALQERDKNS
RPGGGGGSRFGGGGRFGGGGGKFGGRGKDGGGGSFGRRGGGFGGGRGGGGGRNFNRRN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccctattcctaccggactctcccaccgaagaagttaagaccacaaaaactaag
aagctgttgaaacccgatcctatgtccccggatttgaatggcttcgccgaggaggataaa
ttgagcaagaagaagaagaagcacgagaagtccaagcctgaggatggcgagaggaagaag
aagaggaggaaatccgttgaggaagatgaatcgagcaatacctcctccgacgcggttgaa
cccgcctcgattaagaaggtggcggtgaatggatcgctgtcgaagaaggcgagggtcatt
gaggaggaagtggagggtgacggggaactcactgggagtggagaggaggatggtggagat
gccgatccaaatgcgcttacgaatttcagaatctccaaggttttgcgggagaggttgaac
tccaaagggataaaggcgctgtttcagatccaagctatgacttttgacatggtttttgag
ggctctgatttggttggcagagcacggacgggtcagggtaaaacgttggcctttgttttg
cctatattggagtccttaatcaatgggatgcacaaggcttcaaggagtactgcttatggt
agggctccatctgtacttgttcttctacccacgagggagcttgctaatcaggtgcatgtg
gactttgagttttatggtggtgcagtagggttatcctcctgctgtttatatggagggtct
ccttaccgttcccaagagcttgcattgagacgtggtgttgatattgttgttggaacacct
ggcaggataaaagatcatttagagagaggtacacttgacttgaagtccttgaaattccgt
gtgcttgatgaagctgatgaaatgttaaatatgggttttgtggatgatgttgagctcatt
cttggaaaggttgcagatgctaacaaagtccaaacacttctatttagtgctacccttcct
gattgggtgaagaagatatcagcaagattcctaaaaccgctgaaaaaaactgttgatctt
gttggtaatgagaaattgaaagctagtgccagtgttagacatctggttctcccctgttcc
agtgcagcaaggccacacattattcctgacctcattcgttgctacagccgtggcgggcgt
acaattattttcacagagacaaaagaatcagcttctcaactttcagggctattacctgga
tcgcgggccctgcatggtgacataatgcagacacaacgtgagattatactagcaggattt
aggtctggcaaatttttggtcttggtggcaactaacgttgcagcacgtggcttggatatt
aatgatgttcaattgattgttcagtgtgaaccaccacgtgatgttgaagcttatatccat
cgttcaggccgcactggacgagctggaaattctggagttgccatcttgctatatgaacct
agatactctcatagcatttttaaaatagaaaaacaatctggtgtcaaatttgagcacatt
tctgcacctgagccttcagatattgctgacatggctggttctgaagcagtggatgctatt
ctcagtgtttcagatagtgtagttccagtattccgttcgcaagcagaggaactcctaaac
tcatcaaatttgtcagctgtggaattacttgctaaagcacttgcaaaggctgcaggatac
actactattacaaagagatcactcctctcatctttagatgattatgtgacgttacatctt
gtaacagagaagcagatctacacgccagcgtttgcttttagtatattgaagagattcatg
cctgaagaaaagattgcaggagtgaagcacctttctataacagctgattgtatgggtgcg
gtctttgatgtgcctgctgatgatgtagatagtttcattgaaggtcaggaaaatgctagt
atggtggccattgaggttttgaagaaacttcctgccttgcaggagagggataagaacagt
agacccggaggcggtggtgggagcagattcggtggcggcggcagattcggaggtggtggt
ggtaaatttggagggagaggcaaagatggcggcggtggtagttttggccgtaggggtgga
gggttcggtggcggtcggggaggaggcggcgggagaaatttcaacagaagaaactga
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