Dendrobium catenatum: 110099146
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Entry
110099146 CDS
T05027
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dct03016
]
110099146
Enzymes [BR:
dct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
110099146
Transfer RNA biogenesis [BR:
dct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110099146
Prokaryotic type
110099146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
110099146
NCBI-ProteinID:
XP_020681883
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MASPPSSPPVPKKLKMSTTSTSSADEADPAAVPPTTAEPNRRRYKRRKIAIFLSYCGAGY
QGMQKNPGARTIEGEFEEALFHAGAVPESDRGNPKRYDWARAARTDKGVSAAGQVVSGRF
YIDPPGLIDRLNSLLADQIRVFGFKRVTASFNAKKFCDRRRYVYLLPVFALDANAHPDRE
SVVASLGSENELARCLECSERGRKVFGVMRSQLKGSKEEKISELGRDESGRPEEMETEGK
TEVLGTENEPGEGKELDALSNLESADVGTELENGGEANGTKEQPVSKNKASAVEEGAESV
VLDGANEEKITRTASTYIYGDMERESFNSILNRYVGTHNFHNFTTRTKAEDPSARRYIIS
FNADSVITIGGIEFIKCEVVGQSFMLHQIRKMIGLAVALMRKCAPESLMDKALRPDVNIN
VPTAPEVGLYLDECFFSSYNKKWKDSHEALTMEAYAEEVEEFKLKHIYSHIASMEYKEGA
VALWLHSLNHRNYPDFRMEELKKENATVETEVDDLVT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctccttcctcccctcctgttcccaagaagctcaagatgtccacaacaagc
acctcatccgccgatgaggcagatcctgctgccgtaccacctactaccgccgaaccaaat
cgccggcgatacaaacgccgcaagatcgcaattttcctctcctactgcggtgccggctac
caaggaatgcagaagaatcctggtgctcgcaccatcgagggcgagtttgaagaagctctc
ttccacgccggcgccgtaccggagtccgaccgcggaaatccgaaacgatacgattgggct
cgagctgctcgcaccgataagggcgttagtgctgccggtcaggtcgtctccggccgtttc
tacattgatccacccggtcttattgatcgtttgaactcactacttgcagatcagattagg
gtttttgggttcaagcgggttacggcttcctttaatgcgaaaaagttttgtgatcgtcgt
aggtatgtttatcttctacctgttttcgcactcgatgctaatgctcatcccgatcgagag
agtgtggtagcgagcttgggatccgagaatgagctcgctcggtgtttagagtgttcggaa
aggggacgaaaggtgtttggcgtgatgagaagtcaattgaaaggttcgaaagaagagaaa
atatctgagcttggtagagatgaaagtggacgtcctgaagagatggagacggaaggtaaa
acagaagttttggggacagaaaatgagcctggcgaagggaaagaacttgatgctctgtcc
aatctagaatctgcggatgttggtacagaactagagaatggaggagaagcaaatggaact
aaagagcagcctgtgtctaagaacaaggcttcggcagtagaggaaggtgcagaatctgtt
gttctagatggtgccaatgaagaaaaaataacaagaactgcaagtacttacatatatggg
gacatggagagggagagttttaatagtattctgaatcgttatgtagggacacataacttc
cataatttcacaacaagaactaaggctgaggacccctcagctcggcggtatatcatttct
tttaatgctgattcggttatcactattggagggattgagtttatcaaatgtgaggttgtt
ggtcagagcttcatgctccatcaaattcgaaaaatgattggtcttgcagttgcattgatg
aggaaatgtgcaccagaatcgcttatggacaaagctttgagaccggatgttaacattaat
gttccaactgcacctgaggttgggttgtacttagatgaatgtttcttttcttcttataac
aagaagtggaaggactcgcatgaggctcttaccatggaagcttatgcagaggaggttgag
gaattcaaattgaaacacatatactctcatatagcatctatggagtacaaagaaggagct
gttgcactatggcttcattctttgaaccatcgtaactatcctgattttagaatggaagag
cttaaaaaggaaaatgccactgtagagactgaagttgatgatctagtcacttga
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