Dendrobium catenatum: 110099514
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Entry
110099514 CDS
T05027
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110099514
Membrane trafficking [BR:
dct04131
]
Protein recycling
Others
EARP complex
110099514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
COG5_N
Motif
Other DBs
NCBI-GeneID:
110099514
NCBI-ProteinID:
XP_020682354
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MQRESSWVGGRSVHELEPPGPLLFLPLLLLQGGGMDLSRVGEKIFSSVRSARSLGLLPST
SDRPEVPERVAAAAAAARALAGLPPHERIALTSNSEDITFLYGSKDQTLEVLEEEFYEED
FDPVKYILEHIQSGESDTVYFEKKATLRLAQLDKIAERLARNVVEHHEELVKGLQLVMEL
QQDLKVANVICMNGRRHIASSMHEFSRELVVHSHSKKKQALLEMLPILAELHRALDMQLE
LEGLVKEGNFFQAFALLPEYLQLLDGYLELSAIKEMSSGIEAWFERTLQKLDKLLLGVCR
TFREESYATVIDAYVLVGDITGLAEKIQSFFMQEVLSETYSLLKDIVIEDPGNESQKNRF
TYSDLCEHIPESKFRYCLLKTLDSLFNLMCSYYAIMSFNPKRQYIDYPTSNNASNNISTS
RSSKGVESDVDPSGLSDASGLVPREIGSPSADCGIQCSSVDDTTENLGSTVSSSFMSSVD
TCDSSTSASCNSSFYHLRKDATSFVAQTLHRRRESLWQLATSRASVLLSSPVVYSTSTFQ
FLQNYEDLNVFILAGEAFCGLQATEFRNRLKSISENYVAAFHRQNVYALKMVLERENWMK
LSPETMQLISLAGLIGDGAPLIVPSSSNSLAASAIQSMKSSDVVYNGKQKDGFCYWLSIE
NPFSSKLSNGSKQLSNFQALVNGSSVSSSVDTKIVVSLYLDGLKHTNGSGPSLEDENEDL
LADFIDEDSQLPSRISKPTHPKTRSACWDDDEVSAQTGSSICLLRLMDKYARLMQKLEIV
NVDFFKGICQLFGVFYYFIFEVFGERDSYQSARLKSSLSKIIQDCDQWIRRQNQPPSSSP
KSLNASIAHIDVMPTIPSGTGTTFGLKERCVAVEMISFVAQILHRSKAHFQSRLFQQNSA
LIEDFFGNLVDSVPDLTEHIHKTTARTLLHINGYADKIANAKWEVKELGLEHNGYVDLLL
GEFKHYKTRLLLGGIAKEVQDLLLEYGLENVAEVLTEGLSRVRRCNDEGRVLMSLDLQVL
MSGLQHFVSMNVNSKLQVVETFIKAFYLPETEYVYWARSHPEYSRSQVVGLVNLVATMKG
WKRKTRLEVLERIESGN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggaatcgtcgtgggtcggtggccgatctgttcatgagctagagcccccaggg
ccgttgttattccttccactgcttttacttcaaggcggcggtatggatctttctagggtt
ggtgagaaaatcttcagctccgtccgttctgctcgctcacttggcctcctcccatctacg
tccgatcgccctgaggttcctgaaagggtagctgcagctgctgctgcagctcgagctctt
gcagggcttcccccacatgaaaggattgccctcacatcaaattctgaggatattactttc
ctatatggtagtaaggatcaaacccttgaggtgcttgaagaggagttctatgaggaggac
tttgatcccgttaagtatattttggagcacattcagtctggagagagtgacactgtgtat
tttgagaagaaggccactcttaggttagcccaacttgataaaatagcagaacgcctagca
cgcaatgttgtggagcaccatgaagagttggtgaagggtttgcaacttgtaatggagttg
caacaggacttgaaggttgcaaatgtcatttgcatgaatgggagaagacacatagcctct
tccatgcatgaattttcaagggaacttgttgtccattcgcactcgaagaagaaacaagct
ttgctggaaatgcttccaattcttgctgaacttcaccgtgcgttagatatgcaattggaa
ttggaaggtctagttaaggagggaaactttttccaggcatttgctttattacctgaatat
ttacaacttttggatggctatttagagctttctgctattaaagaaatgagtagtgggatc
gaggcttggtttgaacggacgcttcagaagttagataaacttttattaggtgtttgccga
acttttagagaagagagctatgcaactgtgattgatgcttatgttttggttggagatatt
actggtcttgctgagaaaatacagagtttttttatgcaagaggttctttcagaaacttac
tctcttttgaaggatatcgtgattgaggatcctggaaatgaatcacagaaaaatagattc
acctacagcgatctctgtgaacacatacctgaatcaaaatttcgatattgtttgttgaaa
acattggacagcttgttcaatttgatgtgttcatattacgcaatcatgagttttaatcca
aaaagacagtatattgattatccaacttcaaacaatgcatccaataacattagtacttct
cggagctcaaaaggtgttgaaagtgatgtagatccaagtggtttaagtgatgcttctgga
ttagtaccaagagagattggctcaccatcagctgattgtggtatacaatgttcatctgtt
gatgatactacagaaaatctcggctctacagtttcaagttcctttatgtcatctgtagat
acatgtgatagcagcacttcagcaagttgtaattcttctttctatcatttgagaaaagat
gccacttcatttgttgcacaaactttacatagaaggcgggaaagcttgtggcagcttgca
acaagtcgtgcatccgtgttactctcatctcccgttgtttactcaactagtacattccag
tttctgcagaactatgaagatctaaatgttttcatattggctggtgaagcattctgtgga
ttacaagcaactgagttcaggaacagattaaaaagtatttctgaaaactatgttgcagca
tttcacaggcaaaatgtttatgcacttaaaatggtattggagagggagaattggatgaag
ttatctccagagactatgcagctaattagtttggctggcctcattggtgatggcgctccc
ttgattgttccttcttcaagcaattctttagcggcctctgcaattcagtccatgaaaagt
tctgatgtggtttacaatgggaaacagaaggatgggttttgttattggcttagtattgaa
aacccattttcttcaaaactatcaaatggttccaaacaactatcaaattttcaggcatta
gttaatgggtcttcggtatcaagctcagtggataccaaaattgttgtttcattatacctt
gatggccttaagcatacaaatggcagtggcccttctttagaagatgaaaatgaagatctt
ttagctgattttattgatgaggatagccagcttccaagtagaatatcaaagcctactcac
ccaaaaaccagatctgcatgttgggacgatgatgaggtttcagcacaaacaggttcatcc
atttgtttattgagattaatggacaaatatgcgaggctaatgcagaaattagaaatcgtt
aatgttgactttttcaagggcatctgccagctctttggcgtattctattattttattttt
gaggtatttggcgagcgggactcttatcaaagtgctcgactcaagtcttccttgtcaaaa
attattcaagattgtgatcagtggattagacgccaaaatcaaccaccttcatcatcacca
aaatcactcaatgcatccatagcacatattgatgtaatgccaacaattccttctggaact
ggtacaacatttgggctgaaggaaagatgtgttgcagttgagatgatatcctttgttgct
cagatcttgcatagatcaaaagcgcattttcagtcaaggttgtttcagcagaactctgca
ttgattgaggatttctttgggaatctggtagattcagttcctgatctaactgaacacatt
cataagacaactgcaaggacgcttctccatatcaatgggtatgcagataagattgccaac
gctaagtgggaggttaaagagcttggattagagcataacgggtatgttgatttattatta
ggggagtttaaacattacaaaacaaggctgctacttggtggaattgctaaggaggttcaa
gatctcctcctagagtatggacttgagaatgtcgctgaagtactcactgaaggtctgtca
cgtgttaggcgatgtaacgatgaaggacgagtgctgatgtctttggatcttcaggtccta
atgagtggtcttcaacactttgtttcaatgaatgtcaattcaaagttgcaggttgttgaa
acatttatcaaggccttctatcttccagagactgagtatgtgtattgggcacgctctcat
cctgaatactctaggagtcaagttgtagggctagtgaacctggtggctaccatgaaaggg
tggaagaggaagacaagattagaagttcttgagaggattgaatcaggaaactag
DBGET
integrated database retrieval system
