Dendrobium catenatum: 110099698
Help
Entry
110099698 CDS
T05027
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dct
Dendrobium catenatum
Pathway
dct00040
Pentose and glucuronate interconversions
dct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110099698
Enzymes [BR:
dct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110099698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110099698
NCBI-ProteinID:
XP_028548166
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MVVLPYGDVDCGLRALAGKAEGFGRHAIGGLHGAIYVVTNLDDDGCGSLREGCRRKEPLW
IVFEVSGSIQLSSSLRVSSYKTIDGRGQKIKITGKGLKLAECEHVIICNLELEGGRGHDA
DGIQIKPKSRHIWIDRCSLRDFDDGLIDITQESTDITISRCHFSMHDKSLIIGASSTNIT
DRCIRVTIHHCFFDGTKQRHPRVRFAKVHLYNNYTRSWGIYAVCASVESQIISQCNIYEA
GKKKLVFKYLTEMVNLN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtggttcttccttacggcgacgtcgattgtggcctccgtgcgctcgctggtaaggcg
gagggctttggccggcacgccatcggtggccttcatggcgctatttacgtcgttaccaac
ttggatgatgatggatgtggctctcttcgcgagggttgtcgtaggaaagaaccactctgg
atagtttttgaagtttcaggatcaattcagctttcatcaagtctgagggtatcttcctac
aagacaattgatggtcgaggacaaaagataaagataactggcaaaggcttgaaattagca
gagtgcgaacatgtcattatatgtaacttggagcttgaaggtggtagaggacatgatgca
gatgggatccagataaaaccaaagtcaagacatatttggatagatcgctgcagtttacgt
gattttgatgatgggttgattgatattactcaagaaagtactgatatcactatttcaaga
tgtcatttctccatgcatgacaaatctttgatcattggagcttccagtaccaatatcacc
gatcgatgcattcgagtgacaattcaccattgtttttttgatggaacaaagcaaaggcat
cctcgtgttagatttgccaaagttcatctttacaataattacacaagaagttggggcata
tatgccgtttgtgctagcgttgaatcacagattatctctcaatgcaacatatacgaagct
gggaagaagaagttggtttttaaatatctcacagagatggtaaatttgaattga
DBGET
integrated database retrieval system
