Dendrobium catenatum: 110100407
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Entry
110100407 CDS
T05027
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110100407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110100407
03041 Spliceosome [BR:
dct03041
]
110100407
03032 DNA replication proteins [BR:
dct03032
]
110100407
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
110100407
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
Sm proteins
110100407
U2 snRNP components
110100407
Complex B
U1 snRNP components
110100407
U4/U6.U5 tri-snRNP components
110100407
Complex C
U2 snRNP components
110100407
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
110100407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
110100407
NCBI-ProteinID:
XP_020683560
LinkDB
All DBs
Position
Unknown
AA seq
131 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSALGVGRGRAVAMRARAQAAGRGA
PGRGAAPPVRR
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcctagggattccggtgaagcttctccacgaggcagcgggccacatcgtg
acggtggagctgaagagcggtgagctctatcgaggcagcatgatcgaatgcgaggataat
tggaactgccagcttgagaacatcacgtacaccgccaaggatggcaaagtatcacaactt
gagcatgttttcattagggggagcaaagtaagatttatggtcatacctgacatgctaaaa
aatgctccaatgttcaaacgtttggatgcaagaatcaggggcaaaggttcggctcttggt
gttggtcgtggtcgtgctgtggctatgcgtgcaagagctcaagcggctggccgaggcgcc
cctggtcgaggtgctgcgcctccagtaagaaggtaa
DBGET
integrated database retrieval system
