Dendrobium catenatum: 110100687
Help
Entry
110100687 CDS
T05027
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110100687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110100687
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110100687
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110100687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
110100687
NCBI-ProteinID:
XP_020683957
LinkDB
All DBs
Position
Unknown
AA seq
270 aa
AA seq
DB search
MAALHHVDIRNFYIESASFIQFSRRCRSPFVFFDTEFTLSCIFRHSKHHTQLSPTERYSV
LKLNSNVIRPTQVGITVSDGGTSSATWQFELQDFDLRSHSHAPGTISLLESSGINLSRNR
QVGIPSTWLARLLLDAGLVGDFSKATWVAFHGCYDFVILFKALFQLTTNMRVMLPETMEE
FMALTKWFFGGRIYDVKCLIRRCDGLYGGLEKVAEKLNVKRAVGKAHQAGSDSLLTCQVF
LRMKTIYFSLGDDGKERKMPYKGLIFGLNN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcttcatcacgtcgatattcgaaacttctacatcgaatcggcctccttcatc
caattttctcgtcgttgccgctcccccttcgtcttcttcgacactgagttcacactcagc
tgcattttccgacactctaagcatcacacgcagctctcccctaccgagcgctactctgtc
cttaaactgaattccaacgtcatccgccccactcaagtcggcataactgtcagcgacggc
ggcacctcctccgccacttggcagttcgaactccaagacttcgacctccgcagccacagc
catgctcccggcacaatctcccttctcgagtcatctgggataaatctttcccggaatcga
caggttggcatcccctccacctggctcgcccgccttctgcttgatgcgggcctcgtcggt
gacttctccaaagcgacatgggtagctttccacggatgctacgatttcgtaatcttgttc
aaagctctatttcagctgacgacgaacatgcgggtgatgctgccagagaccatggaggag
ttcatggcgctgacaaaatggttttttggtggccgcatatatgatgtgaagtgcttgata
agaagatgtgatgggctttacgggggactggagaaggtggcagagaagctaaacgtgaag
cgtgcggtggggaaagcacatcaggcgggatctgatagtttgcttacttgccaggtgttt
ctgaggatgaagacgatttatttcagtcttggtgatgatggaaaggaaaggaaaatgcct
tataaagggcttatttttggacttaacaattga
DBGET
integrated database retrieval system
