KEGG   Dendrobium catenatum: 110101194
Entry
110101194         CDS       T05027                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dct  Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:dct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dct03041]
    110101194
Spliceosome [BR:dct03041]
 Complex B
  Other components
   Complex B specific factors
    110101194
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_CDC20-Fz WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML LisH_TPL ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st DUF7165 Beta-prop_VPS8 VPS8_N Beta-prop_HPS5 PROPPIN Beta-prop_LRRK2 zf_topless Beta-prop_IFT122_2nd Beta-prop_IP5PC_F WD_LRWD1 7TMR-HDED
Other DBs
NCBI-GeneID: 110101194
NCBI-ProteinID: XP_020684651
LinkDB
Position
Unknown
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDAI
LPQVSQLKLPRDKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQESTKERRRSQIAQALASEVSVVPPSRLMALIGQALKWQQHQGMLPP
GTQFDLFRGTAAMKKDEDDIYPTTLGHQIKFGKKSHPECARFSPDGQYLVSCSVDGFIEV
WDYMSGKLKKDLQYQADDSFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLTFSRDGSQLLSASFDSTARIHGLKSGKMLKEFRGHTSYVNDAIFTND
GSRVITASSDCTVKVWDMKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTEHILVCNKTS
SIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDMNLYCFSHQSGKLEHLM
KVHEREVIGVAHHPHMNLVITYGEDCALKVWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcaaccctagagattgaagcacgagatgtgataaagatagtcttgcaattctgcaaa
gagaattcattgcatcaatccttccaagtattacaaaatgagtgccaagtttcattgaat
actgtggacagccttgaaacatttgttgctgatattaatagtggaaggtgggatgctatc
ttgccccaagtgtcgcagcttaaacttccaagggataaattggaggacttgtatgaacag
atagtcttagagatgatagagcttcgtgagttagacactgcacgtgccatattaaggcaa
actcaggctatgggagtaatgaaacaagagcagcctgagagatatttgagactcgagcat
ttattggttcggacctattttgatcccaatgaggcttatcaagagtcaactaaggagagg
cgtcgttctcagattgctcaagctcttgctagtgaagttagcgtagtgccaccatctaga
ttaatggctttgattggccaggctcttaaatggcagcagcatcaagggatgcttccccct
ggaacacagtttgatttatttagagggaccgctgccatgaaaaaggatgaggatgatata
tatccaacaactcttggccatcaaataaagtttggaaagaaaagccacccagaatgtgca
cgattctctcctgatgggcagtacctagtttcatgctcagttgatgggtttattgaggta
tgggattacatgagtgggaagctcaagaaagatcttcaatatcaggctgatgattccttt
atgatgcatgatgatgctgtactttgtgttgatttcagtagagattcagagatgcttgca
tctgggtcccaagatggaaaaatcaaggtttggcgaatacgaactggtcaatgcttgcgg
cgtcttgagcgggcccattcacagggcgttactagcctcactttctctcgtgatggaagc
cagcttcttagtgcatcatttgatagtaccgcaagaattcatggcctcaagtctggcaaa
atgttgaaagaatttcgaggtcacacttcatatgttaatgatgcaatattcacaaatgat
ggcagccgtgtcattacagcttccagtgattgcactgtgaaggtgtgggatatgaaaaca
actgattgtttacagactttcaagccgccccctcctttaaggggtggtgatgcatcagtg
aactctgttcatctgtttccaaaaaatactgaacacatattagtatgcaacaagacatca
tcaatttacctcatgactcttcaaggacaggtggtgaagagcttttcatctggtaaaaga
gaaggtggagactttgttgctgcctgtgtttcaccaaaaggagaatggatctactgtgtt
ggtgaagacatgaatctgtattgtttcagccatcaatctggtaaactagaacacttgatg
aaggttcacgaaagggaagtgattggtgtagctcatcatcctcacatgaatcttgttatt
acctatggggaagattgtgctctgaaagtttggaaaccatag

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