Dendrobium catenatum: 110101508
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Entry
110101508 CDS
T05027
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dct
Dendrobium catenatum
Pathway
dct03440
Homologous recombination
dct03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110101508
03460 Fanconi anemia pathway
110101508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dct03400
]
110101508
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110101508
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110101508
FA (Fanconi anemia) pathway
Downstream FA components
110101508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
HBB
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
110101508
NCBI-ProteinID:
XP_020685085
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MANLNLNPSAGSNFSAMDTSNTNPILSSKSNIYHISGVPVEFPYKPYGSQLAFMSRVIST
LDRARRQGHCHALLESPTGTGKTLSLLCASLAWQQQQSLRHLSSPASIVSPNAEVADPLL
HGGGFIPDPDASGNPEMPQQGTKAKTQKRLTTPNIYYASRTHSQISQVIREYRKTSYRVP
MAILASRKHYCTNKYVCGKENVDEVCKLLLKDQSGGCLEFKNANKVKSHPSLQIGGCFEV
HDIEDLVRIGQRVKGCSYFAAQTLAAEAQLVFCPYSYIINPIVRRAMDVDIKGCIIILDE
AHNIEDMAREGGSVDIEEEVLHALQVELEQLCMNDNLAVTYRPLYDVIEGIVGWINMRKD
NLQKCEFEHYLSSWTGEKATQELQQGGISQQSFPVLQECATKAIKAASDAAPDEPRLTGI
SLITLEGLFSSLSYFFSGNGCHANDYQLALQRSVKRDGNNAASDWTISLSLWCLNPAVVF
KEIAELSLSVILTSGTLSPVSSFSSELGVRFDTCMEAPHVINTESQLWAAVFSSGVGNIQ
LNASYRSADNYAFQDSLGATLEEICKIVPGGALVFFPSYKLLEKLQARWHQTGQWSRLNA
QKDLFIEPRGSTNEFEPVLRGYYDTISGKSKNVPGKVRLGLKRSLKHSGFKDSHQNLSKG
AAFLAVCRGKVSEGIDFSDDNARVVVIVGIPFPNKNDIQVMLKKKFNDTYRSSKNLISGS
EWYCHQAFRALNQAAGRCIRHRFDYGAIILLDERYREQRNLAYISKWLRSSIKFYKSFDD
SLEGLQTFFRDTKKLQISDEDSNDLTDLNNNKGKSEPFKSSKQATPPKGNQKINKSSNRI
EKIDSDKKTSAKINQFTITSACLVNDSSLGFQPQTPTVKRRAGESNEKILNCCTFNDSEN
KSLNCLWSQSFSPGSSPDLPMVIDEDVRSTGQDTYPIFRNLHKFSDFPTSLTCGKTSNGL
ASQDVGILSVTPAKIASSLPSDPKLENLSVLQNFHQFPEIPSSLSCGTTANEFASQDIGL
STVTPKKLASSEPPDAKQSQHCVMSISSCNQKKRRLKVLQNNSYPEMHFSNLCFDESIAQ
LALPSSINIPRNIDPRTDYSLEDNEKVKLELFKSESQDIIFQSSDICSEIKLHVSCSSCK
YPLGLPKNRFLVKSLMILSSKLFLSYIRTYGTHGSFTPECLSKTPPTVINVLSCEMLSIN
ELIIKGNVNNFSKHGVWCEEDGCVFKAIFCPFCKNYDTCLGVHVLATDSSNASLLNKVLF
YADCLCISEPKTFNESTLPKNDNLLGESSDHIENEKYTPLEEPACDAKQKPAAIMKYTDN
PQAKKPAFSPKERLVDHKNADSHQPKPIEIEKFTYQPQTKPVKFEKFPSNIQKMTDQTVK
FANWSQPRGSNSSATTKSKLKLPKRQENSSKK
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctcaatctcaacccctccgctggaagtaatttctcagccatggatacctca
aacactaaccctattctctcctccaaatccaacatctaccacatcagcggcgtcccggta
gagttcccctacaaaccctacggctctcagctggccttcatgagccgcgtcatctccact
cttgaccgcgcacgccgacagggccactgtcatgctctccttgagtcccccactggcacc
ggtaaaaccctatcccttctctgcgcttcccttgcgtggcagcagcaacagagtcttcgt
cacctctccagccccgcttccattgtctcgccgaatgctgaggttgccgatccccttctc
cacggtggtggtttcatccctgatcccgatgcatctgggaatccagagatgcctcagcaa
ggaacgaaagctaagacccagaagaggctcacgactcccaacatttattatgcatcgagg
acacactctcagatcagtcaagtgattcgggaatacaggaagacatcttaccgcgtgcct
atggctattctggcatcacgcaagcactattgtaccaataagtatgtatgcggtaaagaa
aacgtggatgaagtatgtaaattgctcctgaaggatcaatctggaggttgtcttgagttc
aaaaatgcaaataaagtcaaaagtcatccttctcttcagattggtggatgttttgaggtt
catgatatagaggatctagtgaggattggtcaacgtgtaaaaggttgttcatactttgct
gctcaaactcttgcagctgaagcacagttagtcttttgtccatacagctacatcataaat
ccaattgttcggagagctatggacgttgatatcaaaggatgcattataattcttgatgaa
gcccacaacattgaagacatggcacgtgaaggtggcagtgtggatattgaagaagaagtg
cttcatgcacttcaggtagaattagagcagttgtgcatgaatgataatcttgcggtgaca
tatagaccactatatgatgtcattgagggaattgtaggttggatcaatatgaggaaagat
aatttgcagaaatgtgaatttgagcattatttatcatcttggactggtgaaaaggccacg
caagagcttcaacaaggtggaatttctcaacaatcttttccggttcttcaagaatgtgct
acaaaggcaatcaaagcagcatccgatgcagcaccagatgaaccacgtttaactggcatc
tcattaataactcttgaaggactcttctcctcgcttagttattttttctccgggaatgga
tgtcatgcaaatgattatcagcttgcattgcaacgttctgtcaagcgagatgggaataat
gctgccagtgactggacgatctctctaagcttgtggtgcttaaacccagctgtcgtcttt
aaagagatcgcagaactgtctctctctgtgattctaacatctgggacgctttctcctgta
agctctttttcatccgaacttggtgtacggtttgacacttgcatggaagcaccacatgtg
attaatacggagtcccagctttgggcagcagttttctcttctggagtcgggaatattcag
ttgaatgctagctatagatctgctgataattatgctttccaggattcactgggagcaacg
ttggaggaaatttgtaagattgtaccaggtggtgctcttgttttcttccctagttataaa
ttgttagagaagctacaagctcgttggcatcagacaggccaatggtctaggttaaatgca
caaaaagacttattcattgagccaaggggaagtaccaatgagtttgagccagttctgaga
ggctactatgatacaatttctggaaaaagtaaaaatgtaccaggaaaagttagacttggt
ctaaagcggtcactcaaacattctggctttaaggattctcatcaaaatctaagtaaaggg
gctgcttttcttgcggtttgtcgaggaaaggtatcagaaggaattgacttctcagatgac
aatgcaagagtagttgtaattgttggcattccatttccgaacaaaaatgacattcaggtg
atgttgaaaaagaaatttaatgacacttacagatcctcaaaaaatctcataagtggaagt
gagtggtattgccaccaagcattccgtgccttaaatcaggctgcaggtcgttgcatcagg
cacaggtttgattatggagccattattttgttagatgagcgttatagggagcaacgtaat
cttgcttatatatcaaagtggttgaggagctcaattaaattttataagagcttcgatgac
tcattggagggactgcaaacctttttcagagatacgaagaaactacagatttcggatgag
gattctaatgatcttactgatcttaataataataaggggaaatccgagccttttaagtca
tcaaaacaggcgactccaccaaaggggaatcagaaaataaataagtccagcaatcgtatc
gaaaaaattgattcagataagaagacttcagccaagattaaccagttcacaataacatca
gcttgtttagttaatgatagttctcttggcttccagccacaaactccaacagttaagaga
agggctggagagtcaaatgagaaaattttaaactgctgcactttcaatgattctgaaaat
aaatctctgaactgcttatggtctcaatcattctcccctggaagcagtccagatttaccc
atggttattgatgaagatgtcagaagcactgggcaagacacttacccaattttccggaat
ttacataagttttcagatttcccaacctcgttaacatgtggtaaaacttcaaatggatta
gcttcacaggatgttggcatattatcagttacacctgcaaaaatagcatcttcactacct
tctgatcctaaattggaaaatttatcagttctccaaaacttccatcagtttccagaaatt
ccttcctccttatcatgtggcacaactgcaaatgaatttgcttctcaggatattggccta
tcaaccgttactccaaaaaaattagcatcctcagagcctccagacgccaaacaaagtcag
cattgtgttatgagcataagctcttgtaatcagaagaaaaggaggttgaaggtcttgcag
aacaatagctatcctgaaatgcacttttcaaatctgtgttttgatgaatcaattgctcag
cttgctcttcctagcagcatcaatattcctagaaatattgatccaagaactgattattcc
ttggaggataatgagaaagtgaaactagagctgtttaaatctgaaagtcaggatatcatc
tttcagtcttctgatatttgcagtgaaataaagctgcatgttagctgctcatcctgcaaa
tatcccttgggattgcctaagaacagatttcttgttaaaagcctcatgatactatcatca
aaactctttctgtcatatattcggacatatggaactcatggttcctttacgccagagtgt
ctttcaaagactcccccgacagtcataaatgtcttaagctgtgaaatgttgtccatcaac
gagctaatcattaaaggcaatgtgaacaatttctcaaagcatggagtatggtgtgaagaa
gatggttgtgtattcaaagctatattttgccccttttgcaagaattatgatacttgtctt
ggtgtccacgttttagcaactgattcctcaaatgctagcttactaaacaaggttctcttt
tatgcagattgcctatgcattagtgaaccaaaaacattcaacgagagtactctgcccaaa
aatgataaccttcttggtgaatcttctgatcatattgaaaatgagaaatatactccgctc
gaagaacccgcttgtgatgcaaagcaaaagccagctgcaattatgaaatatactgacaat
cctcaagccaagaagcctgctttcagtcctaaggaaaggctcgttgatcataaaaatgcc
gacagtcatcaacctaagccaatagaaattgagaaatttacttaccaacctcaaactaag
ccagttaagtttgagaaatttccttccaatatccaaaaaatgacagatcaaactgtgaaa
tttgcaaactggtctcagccccggggctctaattcttcagccacaacaaaatcaaagctt
aaactacccaaacggcaagaaaattcctccaaaaaatga
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integrated database retrieval system
