Dendrobium catenatum: 110101746
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Entry
110101746 CDS
T05027
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110101746
Transcription machinery [BR:
dct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
110101746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
110101746
NCBI-ProteinID:
XP_020685443
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MMVMAAVVGLAAGKRLLRNSFYSSDFADKFFPDHGATQPTTASSKSVIFAQKPSNFGMDS
STYRHTEPIKIKALMTHIDTSAPSATDNSFERLNTVEDHGSDIESSLEVLILLQKSMLEK
QWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRADRRRKFTDQNVSEVHLSKGKQHSS
VLSAEFLQTSLGSYVRGTPSEALLRHSEVVHLSRKIKIGLLLEEQKMKLKERLGFEPSDK
QLAFSLKMSCASLRSKLMECSLATEKLAMSNVRLVMSIAQKYDNLGSEMADLVQGGLIGL
LRGIEKFDSSKGCKISTYVYWWIRQGVSRTLAENSRTLRLPTHLHERLSSIHHAKIRLQE
KGITPSIDNIAESLNISTKKVRNATQAISRVVSLDREAFPSLNGLPGDTLHSYIADNNLD
NNPWHGFEEWSLKDEVHSLLSTALNKRERDIICSYYGLDKASETWEDIGKQFGLSRERVR
QVGLVAMEKLKHAARRKKLEAMLIKH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatggcagcagttgtagggctggctgctggaaagaggcttctgagaaactct
ttttattcatcagattttgctgataagttctttcctgatcatggagcaactcagccaacg
acagcctcgagcaagagtgttatatttgctcaaaaaccatcaaattttggaatggattct
tcaacttatagacacacagaacccattaagattaaggctttgatgacacatattgatact
tctgccccctcagccactgataactccttcgaaaggttgaacactgtggaagatcatggc
agcgatatcgaatcttcccttgaagtcctcatcttgttgcagaaatctatgttggaaaag
cagtgggaactttctttcaatcttgcaaggactgtaactaggactgagaagaacagtatg
acccctggcattactcgttctgggatttcggcgcagaaacgaagagccgataggaggagg
aagtttactgatcagaatgtttctgaagtgcatttgagcaaagggaagcagcattcttct
gttcttagtgctgagtttctgcaaactagtttgggaagttatgtaaggggtactccaagt
gaggctttgctcagacattcagaagttgtgcatttgtccagaaaaattaagattggcctt
ttgttggaggagcaaaaaatgaaattgaaggagaggttgggatttgaaccatcagataaa
caacttgccttttcattgaagatgtcttgtgcaagcttgcgttcgaaactaatggaatgt
tctttagcaacagagaagcttgctatgagtaacgttcgtcttgtcatgtccattgcccaa
aaatatgataacttgggttctgaaatggccgaccttgttcagggtggtttgattggacta
cttcgtgggatagaaaaatttgattcttccaagggctgtaaaatttcaacctatgtgtac
tggtggatccgccagggtgtttctcgaacattggccgagaattctaggaccttgagattg
ccaactcatttgcatgagcgattaagctcgattcaccatgcaaagattagactgcaagag
aaaggaatcacaccatctattgataatattgcagagagcctgaatatttcaacaaagaaa
gtgagaaatgctactcaggcaatcagtagagttgtctcgcttgatagagaagcttttcca
tcacttaatggccttcctggagatactctccacagttatattgcagataacaatcttgac
aacaatccttggcatggctttgaagaatggtccctcaaggatgaggttcatagtcttctt
agtacagcccttaacaaacgtgagagggacatcatatgcagctactatggtctagacaag
gcaagtgagacatgggaggatattggaaaacaatttggtttgtcgagggagagagtcagg
caagtgggactggttgccatggagaagctcaagcacgcagcaaggaggaagaaattggag
gcaatgctcataaaacattga
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