Dendrobium catenatum: 110101907
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Entry
110101907 CDS
T05027
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110101907
Spliceosome [BR:
dct03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110101907
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
Cir_Bir_Yir
Motif
Other DBs
NCBI-GeneID:
110101907
NCBI-ProteinID:
XP_020685663
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MEDNLQVVTQDSSMTEYSTVIDAPSTYTMTDSEKGVENLDSSASLPSAQNFNPDDENAHA
YGTSYGAVHVANGNVVSDSCAVAAATDNLVSQEVDAAVPTHTVNYDSMNGVPSEIVDYQS
SEVVEYGASDPHAGAQHFEEVYSAEEERLWNAVRINCLDFNAWTALIEETEKVSEINILK
IRKVYDAFLAEFPLCFGYWKKYADHEARLDGANKVLEVYERAILAVTYSVDIWLHYCLFA
ISTYEDPDIIRRLFERGLAYVGTDYLSYPLWDEYIRYEESQQAWSNLAMIYTRILENPIQ
QLDRYFNCFKHLAASRALSEIRTAEEAALVASSVEVDGHGVEGEVCADGVEQSSKPVSAG
LAEVDELEKYIAIREEMYRKAKEFDSKIVGFETAIRRPYFHVRPLDDPELENWHGYLDFT
ERGDDFNKVVKLYERCLIACANYPEYWIRYVLCMEASGSMELAINALARATQVFVKKQPD
IHLFAARFKEHSGDMLGARSEYELLYSEISPGFLEAILRHVNMEYRLGNKEDALSIYEKA
IAAEQEKDQSQILPMLLILYSRFLYLVAGNAEKARDIFSGALETTQLSKPILEAAIHLES
ILPFPKRIEYLDLLVEKFITPNTDNYCVASTTDREDISCIFLEFLDLFGDPQSIKKADDR
HALLFLRQKGILVSKKRRANDFLASEKAKIAKSSPLPAQSVMGAYPNSQNQWPVGYEQKV
SSWPQGNPQTQGQPWNPGYPLQAGYSAYNYASYGQPQMPTSVAQVTTHGTYAPSYPSQAY
TQQTYAAPTTAATASVAGFQQQQPAAAAQPYYGATYY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggaagataatctgcaagttgttacccaagattctagcatgaccgaatattctactgtt
attgatgctccttcaacatacactatgaccgattcagagaagggggttgaaaatttggac
tcatctgcatcacttccctcagcacaaaattttaatcctgatgatgaaaatgcccatgct
tatggcacaagttatggtgcagtccatgttgccaatgggaatgtagtatctgattcttgt
gctgttgctgctgctactgataaccttgttagccaggaggtggatgcagctgttcccact
catacagtcaactatgattcgatgaatggagttcccagtgaaatagttgactaccagtcc
tcggaagttgttgaatatggtgcttctgatccacatgctggggcacaacattttgaagaa
gtgtattctgctgaggaggaaaggctatggaatgctgttaggattaactgtttggatttc
aatgcctggacagccctcattgaggagactgagaaagtttcagagattaacatcttaaag
attcggaaagtctatgacgctttcttggctgaatttcccttgtgctttggttactggaag
aagtatgctgaccacgaggctcgtctagacggtgctaacaaggtattggaagtctatgag
cgtgcaattctagctgttacctattccgtggatatttggttgcactattgtctttttgca
atatcaacttatgaagacccagacatcattcgaaggttgtttgaaaggggattggcttat
gttggaactgattatctttcgtacccactgtgggatgaatatattagatatgaagaatca
caacaagcatggagtaatctggccatgatttataccagaatacttgagaatcctatacag
caattggatcgctatttcaattgctttaagcacttggctgccagtcgagctttatctgaa
ataaggactgctgaagaagctgccttagtggcttcttctgttgaagttgacggtcatggt
gttgagggagaggtttgtgctgatggtgtagagcaatcttctaaacctgtaagtgcaggc
ttagcagaagtggatgagttggagaagtatattgcaattagggaagaaatgtataggaaa
gctaaagagttcgattctaagatcgttggttttgaaacagctattagaaggccatacttt
catgtcaggcctcttgacgatccagagcttgagaactggcatggctatctggattttact
gaaagaggcgatgattttaacaaggttgtcaagttatatgaaaggtgcttgattgcatgt
gccaactatcctgaatactggatccgctatgtgttatgcatggaagctagtggaagtatg
gagcttgctatcaatgctctggctcgagccacccaagtctttgtcaagaagcaaccagac
attcatctttttgctgctcgattcaaggaacacagtggagatatgttaggtgcacgctca
gagtatgagcttctttactcagaaatatcacccggctttttagaagctatattgaggcat
gtgaacatggagtatcgtttgggaaacaaggaggacgctctctccatatacgagaaggct
attgctgctgaacaggaaaaggaccagtctcagatcttaccgatgttgcttattttgtat
tcacgcttcttgtatttggttgctggcaatgctgaaaaagcaagggacattttctctgga
gccctagaaactactcaactatcaaaacctattcttgaggctgccattcatttggaatca
attcttccttttccaaagcgtattgaatatttagatttactggtcgagaagttcattacg
cctaatacagacaactactgtgtggctagtacaactgacagggaggatatatcatgcata
tttttggagtttctcgatctatttggagaccctcagtcaatcaaaaaggctgatgaccgg
catgctttgctgttcctgcggcaaaaaggcattttggtgtccaagaagcgtcgggcaaat
gattttctagcatcagagaaagcaaaaatcgcaaagagttctcctttgcctgctcaatct
gttatgggagcatatcctaattcgcagaaccagtggcctgttggttatgaacaaaaagtt
tcttcttggccacaaggaaatccgcagacacaagggcaaccctggaatccagggtatccg
ttgcaggctggatatagtgcatacaattatgcgagctatggccaacctcagatgcccaca
tcggtagctcaggttactacacatggcacatatgctccgagttatccatctcaggcatat
acacagcagacctatgctgcaccaactaccgcagcaacagcatctgtggcaggattccag
cagcagcagccggcagctgctgctcagccatactatggtgccacctattattga
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