Dendrobium catenatum: 110102006
Help
Entry
110102006 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110102006
03015 mRNA surveillance pathway
110102006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110102006
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110102006
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110102006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HTH_SB
Motif
Other DBs
NCBI-GeneID:
110102006
NCBI-ProteinID:
XP_020685798
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MADDSSSSAPTKTEKKSWADEESDEEVTSPADPPLGGSKDVEQLELNKIALGGSKDVEQS
ELNKIALGSSKDVEQSELNKIESLSISEDKGKEKDEDRDGGDGLLDNPEDSNIKAVTTGD
SVYSSATRFEDLNLSKDLLKGIYTEMRFHRPSKIQAISLPMILTPPYKDLVAQAHNGSGK
TTCFVLGMLSRVDPNKKLPQAMCICPTRELAQQNQAVLLKMGRFTGITSFLAIPADSANY
VPISKLPPVTDQVVIGTPGTIKKWTSAKKLSTREIKILVFDEADHMLAEDGFRDDSLRIM
KEIQSSSTAGCQVLLFSATFNDAVKEFALRVVKNGNQLFVKKEELTLDKVKQYKVYCPDE
LAKIDVIKDKIFEFGQKVGQTIIFAHTRNSARMLHQTLSKDGYECTAVQGALSQELRDKI
VKEFKDGLTKVLITTDLLARGFDQAQVNLVINFDLPVKHDFPSEPDYEVYLHRIGRAGRF
GRKGAAFNLMCSERDRMLMEKIERHFNHTIPEVDNWRSEEDFEKALKDAGLL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacagcagctcatcggcccctacgaagaccgagaagaagtcctgggctgac
gaggaatccgacgaagaagtcacatcacctgccgatccgcccctaggcggcagtaaagat
gtggagcagttggagctcaacaagatcgccctaggcggcagtaaagatgtggagcagtcg
gagctcaacaagatcgccctaggcagtagtaaagatgtggagcagtcggagctcaacaag
atcgagtccctctccatatccgaggataagggcaaagaaaaggatgaggatagggatggc
ggggatgggctgcttgacaacccggaggattcaaacatcaaagctgttacgactggggat
tcagtttattcatcggccacgcgttttgaagatctgaatctgtcaaaggacttgcttaag
ggaatatatacggagatgagatttcacaggcctagcaagattcaggccataagccttcca
atgatcctcaccccaccgtataaggatttagttgctcaggctcataatggttcaggaaag
actacatgttttgtgcttggtatgttgagtcgggttgatcccaacaaaaaattgcctcag
gctatgtgtatttgtcctacgagggaactagcccagcagaatcaagctgttcttttaaag
atgggaaggttcacaggcataacatcttttctggctatccctgctgattctgctaattat
gtcccaatctctaaattgccacctgtgactgatcaagtggtgattggcactccgggtacc
atcaagaagtggacatcggctaaaaagctgagcactagagaaattaagattcttgttttt
gatgaggcagatcacatgctagctgaggatggtttcagggatgattctttgaggattatg
aaagagatacaaagtagcagcacagcaggctgtcaggtacttctgttttctgccacattt
aatgatgcagtcaaggaatttgcattaagggttgttaagaatggaaatcagttgtttgtg
aagaaagaagagctcacacttgataaagtgaagcaatataaagtttactgtcctgatgaa
cttgccaaaattgatgtcataaaagataagatatttgagtttgggcaaaaggtggggcaa
actataatatttgcgcatacaaggaatagtgccagaatgttacatcagacattatccaaa
gatgggtacgagtgtacagcagttcagggcgccttgagtcaagaacttagggacaagatt
gtcaaggaattcaaagatggattgacaaaagtcctcataacaacagatctccttgctcga
ggctttgatcaagcacaggttaatttggttatcaactttgatcttcctgttaagcatgat
ttcccgtcagagcctgattatgaagtttatttgcatagaattggtagagctggacgtttt
ggacgcaaaggtgctgcattcaacttgatgtgcagtgaaagggaccggatgctcatggag
aaaattgagcgccattttaaccacactataccagaggtagataactggcgaagcgaggaa
gattttgaaaaagctctcaaagacgctggtttgctatag
DBGET
integrated database retrieval system
