Dendrobium catenatum: 110102099
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Entry
110102099 CDS
T05027
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110102099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110102099
Spliceosome [BR:
dct03041
]
Complex C
Other components
Step II factors
110102099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
eIF2A
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
110102099
NCBI-ProteinID:
XP_020685934
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MDLLRSYADKADDDVDSPEEPFKEPENTSDSPSSPVTSSDSPPHMSLPVKTSAPRVDDTA
LALTTAVSDRIIHRPLDPSQHAVSFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFV
EDASIHSFLFDEQYNTFHKYGYAADPSGLSYVGDLETLERNEALSVYNIPQQEQKRRRLE
LKGNEADASAETADNTNPGTENPASDEWLLKNRKSPWSGKREVIQGELTEEQKKYAEEYA
EKKAEKERGGEGRGDKTDPVDKSTFHGKEERDYQGRSWVAPPKDAKPSNDHCYIPKRWVH
TWSGHTKGVAAIRFFPKHGHLLLSAGMDSKVKIWDVFNSGKCMRTYMGHSKAVRDISFSN
DGAKFLSAGYDKNIKLWDTETGKVISTFSTGKVPYVVKLNPDQDKQHILLAGMSDKKIVQ
WDMDSGKITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH
SMPSISLHPNGNWLAAQSLDNQILIYSTKERFQLNKKKRFAGHIAAGYACQVNFSPDGRF
VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGMIKYW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccgaagttacgcagacaaagctgatgatgacgttgactcaccggaagaa
ccttttaaagaacctgaaaacactagcgattccccttcctcgccggttacctcttccgac
tcccctccgcacatgtccctcccggtcaaaacctcggccccgcgcgtcgacgacactgcg
ctcgccctaacaaccgccgtttccgatcgcataattcaccgccctctcgatccatcgcaa
cacgccgtcagtttcaaccctacctacgaccagctctgggccccgatctatggccccgca
catccctatgccaaggacggcatcgcgcagggcatgcgaaatcacaagcttggttttgtc
gaggacgcctcaatccattccttccttttcgacgaacagtacaacaccttccacaaatac
ggctacgctgccgacccttccggcctctcctacgtcggcgatctcgaaaccctagaacgc
aatgaagcgttgtcggtgtacaatatccctcagcaggagcagaagcgccgccgcctcgag
ctcaagggtaatgaagccgatgcctccgctgagacggccgataacacgaacccgggcaca
gaaaatcccgcgtcggatgagtggctcctcaagaaccgcaaaagtccttggtccggtaag
agggaggtgattcagggggagcttacggaggagcagaagaagtacgctgaggagtacgcg
gagaagaaggctgagaaggagcgaggtggcgagggtagaggggataagactgatcctgtc
gacaagagcacttttcatggtaaggaggagagggactaccagggacgttcttgggtcgct
cctcccaaggatgccaagccttctaatgatcactgttacattccgaagcggtgggtgcat
acttggagtggccacaccaagggtgttgctgcaattcgattcttcccaaagcatggtcac
ctactcctctctgcgggcatggactccaaggtcaagatctgggatgtgttcaattcggga
aaatgtatgagaacctatatgggacactccaaggcagtcagagacatatccttctccaat
gatggtgcgaagttcttgagcgcagggtatgacaagaatataaagttatgggatactgag
actggtaaggtgatctctactttttccactgggaaagttccttatgttgtgaaactcaac
ccagatcaagacaagcaacacattctccttgcggggatgagtgataagaagattgtccag
tgggatatggattctgggaagatcacacaagagtatgatcagcatctgggtgctgtgaat
accatcacttttgtggataacaatcggaggtttgttacctctagcgatgacaaatctctt
cgtgtctgggagtttggcataccggtggtcatcaagtatattagtgagccgcacatgcac
tcaatgccatcaatttcacttcatcctaatggcaattggctggccgcacaaagcttggat
aaccagattcttatctatagtacaaaggagagatttcaattaaacaagaagaaaaggttt
gcagggcatattgcggcaggctatgcttgtcaggtcaatttttcaccggatggacgattt
gtaatgtcaggagatggggagggcaagtgctggttttgggattggaagagttgtaaagtc
tttaggaccctaaaatgccatgaaggagtttgcattgggtgtgaatggcatcctttggag
cagagcaaggttgcaacttgtggatgggatggcatgatcaaatactggtaa
DBGET
integrated database retrieval system