KEGG   Dendrobium catenatum: 110102105
Entry
110102105         CDS       T05027                                 
Name
(RefSeq) histone-binding protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
dct  Dendrobium catenatum
Pathway
dct03082  ATP-dependent chromatin remodeling
dct03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110102105
   03083 Polycomb repressive complex
    110102105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dct03036]
    110102105
Chromosome and associated proteins [BR:dct03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     110102105
  Histone modification proteins
   HAT complexes
    HATB complex
     110102105
   HDAC complexes
    Sin3A-HDAC complex
     110102105
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     110102105
    PRC2.2
     110102105
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     110102105
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110102105
  Chromatin remodeling factors
   NuRD complex
    110102105
   NuRF complex
    110102105
   NuRF complex (fruit fly)
    110102105
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd Beta-prop_EIPR1 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 WD_LRWD1 EIF3I WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 110102105
NCBI-ProteinID: XP_020685940
LinkDB
Position
Unknown
AA seq 408 aa
MQIPEDGAASAAEEFRVWKKNSPLLYDLVISHALEWPSLTVQWLPSASSSHSWSSARLIL
GTHTSDDTPNFLMISAVQLPSPTHIAGEPLLNSPLPPVPNIRIEQRISHEGEVNRARHMP
QKPSLIATKSCGPEVHVFDSGKRPTIPPNGEPCRPDFVLRGHLTEGYGLAWSSMKEGYLL
SGSYDSKICLWDVGSVTNEKVLDAKEVFEAHEAAVEDVDWHFDNENLFGSVGDDHRLMLW
DLRSSRKPEHSVLAHGDEVNSLSFNPFNEWLLATASVDTNIKLFDLRKLTSSLHTFYSHT
GPVLQVEWSPHHETLLASSSEDKRLMVWDLCRIGDEQNEGDASDGPPELLFVHGGHTAKI
SEFSWNPEEPWVFASVAEDNILQVWQMAESIYRDFYDNESDGDAYAIS
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgcagatacccgaggacggagcggcttcggcggcggaggagttcagagtgtggaagaag
aacagtccattactctacgatctcgtcatttctcacgccctcgagtggccgtcgctcaca
gtccaatggcttccctctgcatcatcctcccattcctggtcctccgctcgcctcattctg
ggcactcacacatccgacgacacgcctaacttcttgatgatctccgctgttcagctccca
tctcctacccatattgctggtgagccgctgctgaactcgccactgccgccggtacccaac
atacggatcgaacagaggatcagtcacgagggggaggtaaaccgagcgaggcacatgccg
cagaagccttcgctgattgcgaccaagtcatgtggaccggaggtgcacgtgtttgactcc
ggaaagcggccgacgatcccgccgaatggggagccatgcagacccgacttcgttttgagg
gggcatttgacggaaggttatggcctagcttggagctcgatgaaggaaggataccttttg
agcggctcatacgattctaagatttgcctgtgggatgtgggcagtgttacaaatgagaag
gttcttgatgccaaggaggtctttgaggctcatgaggctgcagttgaagatgttgactgg
cactttgataatgagaatttgtttggttctgtgggcgatgatcatcgtttgatgttgtgg
gacttgcgttcatcaagaaaacctgagcattcagttttagctcacggagatgaggttaac
agtttatcctttaacccatttaatgagtggcttcttgcgactgcatcagtggacacaaat
attaaactgtttgatttacggaagctgacatcgagtttgcacactttctatagccacaca
ggacctgtacttcaggttgaatggagccctcatcacgaaactctgttggcctcatcttct
gaggataaaagactgatggtttgggacctttgccgaattggtgatgagcaaaatgaaggg
gatgcctcggatgggcctcctgagctgctttttgtacatggaggccacactgcaaagatt
tccgagttctcatggaaccctgaggagccctgggtgttcgccagtgtcgctgaggataac
attttgcaagtctggcagatggcagagagcatatatcgagatttttatgacaatgaaagc
gatggagatgcatatgctatcagctga

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