Dendrobium catenatum: 110102431
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Entry
110102431 CDS
T05027
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110102431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110102431
Spliceosome [BR:
dct03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110102431
Complex C
U4/U6.U5 tri-SnRNP related factors
110102431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
HIND
Motif
Other DBs
NCBI-GeneID:
110102431
NCBI-ProteinID:
XP_020686428
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MANRTDPTAKSIHGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
FGGNRKPTPFLCLVMKMLQIQPEKEIVVEFIKNEDYKYVRILGAFYLRLTGSVTDVYQYL
EPLYNDYRKLRQKLSDGKYSLTHVDEVIDQLLTTDYSCDIALPRIQKRWTLEASGILEAR
RSALEDDFEEEEEKEDEAQAMDVDVNTHEKGYYHGRSPTRDRDRDRKRDNYKYRERDYDR
DRDYDRDYGRGRERDRDRERDRHRLRDEKGFGRERDRERERDGRERDRRERDRGKRRSRS
RSRSRDRRERDREDGEHRRRRARGSSISPRRQPADDGNFQDESKKKKKKEKDKKSDGTDH
PDPEIAEANRLRASLGLAPLKL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaggacggatcccactgcaaagagcatccatggaacgaaccctcagaatctc
gttgagaagatcgtccgctcgaagatctaccagaatacctattggaaggagcaatgcttt
ggtctcacagctgagacgctcgttgacaaagccatggaacttgaccaccttggcggtacc
ttcggaggcaaccgcaagcccactcctttcctttgtctcgtcatgaagatgctccagata
cagcccgaaaaggagatagttgttgaatttatcaagaacgaggactacaagtatgtccgc
attctgggtgctttctacttgcggctgacggggtcggtgacggatgtgtaccagtacctc
gagccgctatataatgattacaggaagcttcgacaaaagctttctgatggaaaatattct
ttgactcatgtggatgaagtgattgatcagcttctcacaaccgattactcatgtgatatt
gctcttcctcgcatccagaaaagatggactcttgaagcttctggaattttggaagctagg
aggagtgctttagaagatgattttgaggaggaagaagagaaagaagatgaggcacaagct
atggatgttgatgtaaacacccatgaaaagggttattatcatgggcgaagtccaacaagg
gacagagatagagatagaaagcgcgataattataaatatagggaacgggactatgatagg
gacagggattatgatcgggactatggcagagggcgtgaaagagaccgagatagggaaaga
gaccgccatcgtcttagagatgaaaagggctttggtcgagagagggatcgcgaaagagag
agggatggcagagaacgtgataggagagaacgtgatcgtgggaaacgaaggagtcggtcg
aggagcaggagtagggatcgccgagagcgagaccgtgaggatggggagcaccgcaggagg
cgcgctcgtggcagcagcatcagtcctcgtagacagcctgcagatgatggtaattttcag
gatgaatccaagaagaagaagaagaaggaaaaagataaaaagagtgatggcactgatcac
ccggacccagagattgcagaagccaataggcttcgggcttctcttggtctggcaccattg
aagctctaa
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