Dendrobium catenatum: 110102499
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Entry
110102499 CDS
T05027
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110102499
Membrane trafficking [BR:
dct04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110102499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
HisZ-like
Motif
Other DBs
NCBI-GeneID:
110102499
NCBI-ProteinID:
XP_020686507
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MSSSSPPLQADQTDDEFFSKLVDSDYEAGQSHSNEEDMVRAMSNFSLGEVEDSGSASEVN
GQKDNQCLSFSEATKNDASVGGQSEGLTEGAAIGAGASFKEIQWSAFNSQQFGLGDFESD
LFMGSGFGSFVNSKEFSDSESTLIENTTENLSSHVDSYEQQYAQVYSSISEQSAGLTEVK
NWENIYPDRKYETITRLCYQLDDNNATAPSQSDNFITTSANTHESSEVKSQNAFGGSVSE
RSDIVNLQQTSHTLLETISEESSVLKSGNQVSQDNQDYPPNMVFDPRYPEWYYDTITQMW
YTLESYNHALHDASNSSQVPFNNNANALAKIQDAFEGSISEISTVVNLPKSSHPVIETIS
EEGCVLNSRNQFPPNMVFDPQYPEWYYDTITKKWYTIESYNYAIHNASNVIQDQLATNVS
LDEAQHAFEGSLLETSDAVNVQQTSQQALETITEESSIFNSSKQVLQDSIYYPPNMVFDP
QYPEWYYDKNTLMWYTLESYNHSLQDATDATQGLLTTNENSLAGLNIDDSHLSYGSHAQF
GQYTMLERSSQKSHLNASESCFGKQSMWQEKNGQEGHLNTSGGGYGLTGLWQEQTIKESH
SKASGSYDKQKMWQPKFLTKNGDVATSLNNQLMGSFYSSLEYTGSHSDKQLDPIHLEPMV
KHKIGRSNMTVAQGYVTSESMHHVNQPNMEQSLQAYLSNNNYGTESSMHYTNQSFHGANP
SYSQFSYNHNDGRSTAGRPPHALVTFVFGGRLLVMKDASFPSSSFVSGSQGTVGGVVSIH
SLVDVVMTKADFWNTSAGCFGYFHTLCQESFPGPLVGGNAASKDINKWINDKISSSESSS
SFFQNGLLLWLLLSLLKILCQHYGKLRSPYGAEPSHEGSNGPESAVSKLFASVKRKDTSF
GGGYSLHCMKSPLPEGNIRATASEVQNLLVSGRRKEALQRAQEGRLWGTAVVLAAQLGEQ
FYMDTVKQMALQQFVCGSPLRTLYLLIAGQPADVFSSDSFSSGSSVTASGPYQSFEVIPN
GLLDDWHENIAIIASNRTKDDELVIIHLGDCLWKERGEVAAAHACYLLAEVNFEPYSDSA
RLCLIGADHWKNTRTYACPDSIQVNRSHPFLSENCLHRSKVYLTTANGHHLHSSPPPLLG
RPRHPRPFSSLLSARLQPLVTARRLSLPYITSADSC
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcttctcctccgttacaggcggaccagacggacgacgagttctttagtaag
ctcgtagatagcgattatgaagctggccaatctcactcgaatgaagaagacatggttagg
gccatgtcgaattttagtcttggggaggtggaggattctgggtctgcgtctgaagtgaat
ggccaaaaggataaccaatgtttgagcttttcagaggctaccaagaatgatgcttccgtt
ggaggccaatctgaaggtttgaccgaaggggcagctattggtgctggggcgagttttaag
gagatacagtggagtgccttcaattcccagcagtttggactgggtgattttgaatctgat
ttatttatggggagtggttttggtagttttgttaactcaaaagaattttctgactctgaa
tcaaccttaatagaaaacacaaccgaaaatttgagctcgcatgttgattcctatgaacaa
caatatgctcaagtttatagctctatcagtgaacaaagtgcaggtttgacagaagtgaag
aactgggaaaatatttaccctgacaggaagtacgagacaattactcggctatgttaccag
ctagatgataataatgctactgcacctagccaatctgataatttcataacaacgagtgca
aatacccatgagagtagtgaagttaaaagtcagaatgcatttggagggtcagtatcagag
agatcagatattgtgaatcttcagcagactagtcatacacttttagaaaccatatctgaa
gagagcagcgtcctaaagagtgggaatcaggtttctcaagataaccaagactaccctcct
aatatggtgtttgatcctcgatatccagaatggtattatgacacaatcacacaaatgtgg
tatactcttgagtcatataatcatgcccttcatgatgcttcaaattcatctcaagtccct
ttcaataacaatgcgaatgctttagctaaaattcaggatgcctttgaaggatcgatatca
gagatatcaactgttgtgaatcttccgaaaagtagtcacccagttatagaaaccatatct
gaggagggctgtgtcttaaacagtcggaatcaattcccccctaatatggtgtttgatccc
caatatcctgaatggtattatgacacaatcacaaaaaagtggtatactattgagtcatat
aattatgccattcataatgcttcaaatgtaattcaagaccaacttgctaccaatgtgagt
ttagatgaagctcagcatgcctttgaaggatcattgctggagacctcagatgctgtgaat
gttcaacagactagtcagcaagctttagaaaccattactgaagagagcagtatctttaac
agtagtaaacaggttcttcaagatagcatatactaccctcctaatatggtgtttgatcct
caatacccagaatggtattatgacaaaaacacactaatgtggtacactctcgagtcatat
aatcactcccttcaggatgctacagatgcaactcaaggcctgctgactaccaatgagaac
tctttagctgggttgaacatagacgattcccacctctcatatggcagccacgctcaattt
ggacaatacacaatgctggagcgaagtagtcaaaaaagtcatttgaatgcatctgaaagt
tgctttggaaaacagagcatgtggcaggagaagaatggtcaggaaggtcatctgaataca
tctggcggtggatatggtcttacaggcttgtggcaggagcaaactattaaagaaagtcat
tctaaagcatctggtagttatgataagcagaaaatgtggcagccaaaatttctcactaaa
aatggagatgtagctacttctttgaataatcagctgatggggagcttttatagttcactg
gaatatactggaagccattcagataagcaattagatcctatccatttagaacccatggtg
aagcataagattggcagaagtaacatgactgttgctcagggatatgttacttcagaaagc
atgcaccatgttaatcaacctaacatggaacagagccttcaggcatatttatctaacaat
aactatggcactgaaagctctatgcactatactaaccaatcatttcatggtgcaaatcca
tcttattcacagttttcatataatcataatgatgggagatcaacagctggacggcctcca
catgcattagttacttttgtatttggtggaaggcttctagtcatgaaagatgccagcttt
ccaagttcaagttttgtttctggaagtcagggaactgtaggaggtgtagtgtcgattcat
agcttagtggatgttgtgatgacaaaagcagacttttggaacacttctgctggatgcttt
ggttacttccatactttgtgccaggaatcctttcctgggcctcttgtcggtgggaatgct
gcttctaaagatataaataaatggataaatgacaagatatcgagtagtgaatcttcaagc
tcatttttccaaaatggtttactcttatggttgcttctttctttactgaaaatattgtgt
caacattatggcaaacttcgatctccatatggtgccgaaccatcacatgagggaagcaat
ggtccggagtctgcagtctctaagctgtttgcatctgttaaaagaaaagatacttctttt
ggaggtggttattccttgcattgcatgaaaagtccactccctgaaggaaatataagggct
actgccagtgaggtgcaaaatctgttggtttctggaagaagaaaagaggcactccaacgt
gcacaagaaggtcgcttgtggggtactgctgttgttcttgcagcacagcttggtgagcag
ttctatatggacactgtaaaacaaatggcacttcagcagttcgtatgtggttcaccatta
agaacattatacctacttattgctgggcaacctgcagatgtgttttcttcagatagcttc
tccagtggctcatccgttactgctagtggaccataccagtcttttgaggttattccgaat
ggcttgttagatgattggcatgaaaatatagcaataattgcctcaaacagaacaaaggat
gatgagctcgtcattattcaccttggagattgtctatggaaggagagaggagaggtagct
gctgcacacgcctgctacttgcttgcagaagtaaacttcgagccatactctgacagtgca
aggctctgtcttattggtgcagatcactggaaaaatactcggacatatgcttgtcctgat
tccattcaggtaaatcgttcccacccatttttgagcgagaactgtttacaccgctccaaa
gtttacttgaccaccgccaatggccaccatctccatagctcgccgccgccgctcctcggc
cgcccccgccaccctcgtcccttctcttcgctactctcagctcgcctccaaccactagtc
actgcgcgccgcctatcgctgccgtacatcacctccgccgacagttgctag
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