Dendrobium catenatum: 110102526
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Entry
110102526 CDS
T05027
Name
(RefSeq) zinc finger CCCH domain-containing protein 45
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110102526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110102526
03019 Messenger RNA biogenesis [BR:
dct03019
]
110102526
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110102526
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110102526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH_12
Torus
zf-CCCH_3
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
110102526
NCBI-ProteinID:
XP_020686551
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MEDPEGTLSFDFEGGLDAVAPLGVVAGSASFLPSETTPAPSTATAGNIGSAASDAAATGG
NIAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT
NEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEVFQKIQQLFNYGSSSRFFQHRNS
GYNQQMEKSQLLQGSAVTNQSAEPKAPGSVEPLVSQQQPQDQQSQQQQEPPQQQRHPHQL
QQQNYSENQVQSITNGLPNQSNRTASPLPPGQSRYFIVKSCNRENLEISVQQGVWATQRS
NEAKLNEAFESTENVILIFSINRTRHFQGCAKMTSKIGGFIGGGNWKYAHGTAHYGRNFS
VKWLKLCELSFNKTHHLRNPYNENLPVKISRDCQELEPFIGEQLASLLYLETDSELMQML
IAAESKREEEKAKGASNADDTAENPDIVLFDDNEEEEEDESDEEDDSLVSLQGRGRGRGM
FWQPAMQLARGGRPVLGIRGFPPVMMGVDGFGYGAVGHEGFGAPDIFGGPPRVFPPYGGP
RFSGDFSGAGPMPGLGFPGRPPQPGYFPMGGLGMIMGAGRAFMGGIPMAGVGRPNRPIGI
PPFLHPPPPNNWATKREQRRPASERYESGSDQGNRGQETAGQDDEVGYQHGSRAPNEDRF
GAVNRYTNDESESEDEPAPRRSRHGENSKKRRGSEGEPVADHWEAPFIEASNH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccggaagggacccttagcttcgacttcgagggcggtcttgatgctgtcgct
cctctcggcgttgtagcgggatctgcgtctttcttgccctccgaaactacccctgctccg
agcaccgcgaccgccggcaatattgggtctgcagcctctgacgcagcggccaccggaggg
aacattgctggtcggaggagctttcggcagacggtgtgtcggcactggctccgcagcctt
tgcatgaagggggacgcctgtggctttctccatcagtacgataaggctcggatgccggtc
tgccggttcttccgcctctacggggagtgccgggagcaggattgcgtgtataagcacacc
aacgaggacataaaggagtgcaacatgtataaatttggattctgcccaaatggcccagat
tgtcgttatagacatgcgaaactacctggtcctcctcctcctgttgaagaagtttttcag
aagattcagcagctattcaattatggttcgtcgagcagattttttcagcaccgaaatagt
gggtataatcaacagatggagaagtctcaacttcttcaaggctctgctgtaactaaccaa
tctgcagaacccaaagctcctggttcagtcgaaccacttgtttcacagcaacaaccccaa
gatcaacaatctcaacaacaacaagaacccccacaacaacagcggcatccacatcaatta
caacaacaaaactatagtgaaaatcaggtgcagagcatcaccaatggcttgcctaaccaa
tctaatagaacggcatcaccccttcctccaggacagtctaggtactttattgttaaaagt
tgcaatcgtgaaaacttggaaatttctgttcagcaaggtgtttgggcaacccaaaggagt
aatgaagctaaacttaatgaagcatttgagtccacagagaacgttattttgatattctca
atcaaccggactcggcatttccagggttgtgcaaagatgacttctaaaattggtggattt
attggtggaggcaattggaaatatgcacatggaacagctcactatggtcggaacttctcg
gtcaaatggctgaagctgtgtgaattgtctttcaataagacccatcatttgaggaatccc
tacaatgaaaacctaccagtgaagataagtcgagactgccaagagttggagccttttatt
ggtgagcagttggcttctcttctttatctcgaaacagacagcgaacttatgcaaatgctg
attgctgcggaatctaaacgcgaggaagagaaagcaaagggtgccagcaacgccgatgat
acagccgaaaatccagatattgtgttgtttgatgacaatgaagaagaggaggaggatgag
agtgatgaagaggatgatagtttagtcagcctccaaggaagaggaagaggaagagggatg
ttttggcaacctgccatgcaactagcacggggaggaagaccagttcttggcatccgaggc
ttccctcctgtgatgatgggtgtagatggattcggttatggagctgttggtcacgagggc
tttggtgcaccagatatttttggaggaccgcccagggttttccctccatatggtggccca
agattttctggcgacttctctggagcaggtcctatgcctggtttagggtttccgggtcgg
ccgccccagcctggttactttcctatgggtggactgggaatgataatgggtgcgggccga
gcattcatgggcgggataccaatggctggtgttggccgacccaatcgtcccattggcatc
ccacctttcctccatccgcctccgcccaacaactgggctacaaagagggagcaaaggaga
cctgccagtgaaagatacgaatctggatcagatcaaggaaacagaggtcaggagaccgcg
ggtcaagatgatgaggtggggtatcaacatggatcgagggctccaaatgaggacaggttt
ggtgcggttaaccgatacacgaatgatgagagtgaaagcgaggatgagccagctcccaga
aggtcaagacatggcgaaaacagtaagaagcggcgcggatcagaaggggaacctgtagca
gatcattgggaggccccttttattgaagcttcaaaccattga
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integrated database retrieval system
