Dendrobium catenatum: 110102537
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Entry
110102537 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110102537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110102537
03009 Ribosome biogenesis [BR:
dct03009
]
110102537
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110102537
Spliceosome [BR:
dct03041
]
Complex A
U1 snRNP components
U1 related factors
110102537
Complex B
110102537
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
Helicases
110102537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Motif
Other DBs
NCBI-GeneID:
110102537
NCBI-ProteinID:
XP_020686565
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSASATADSSSSSTKGRIRYAPADPTLPKPWRGLVDSSSGYLYFWNPETNVTQYEKPLPS
SPPPPMPQREDSPSTATKDSEIYDGDRLQESNAASLDCYQNQEPGPEKVDDEPPYMQISQ
ANQDAGVGLSAEAYRRRHEITVIGANVPIPYITFESTGFPSEILREINQAGFSAPTPIQA
QSWPVALQNRDIVAVAKTGSGKTLGYLIPGFIHLKRLSKDARMGPTVLVLSPTRELATQI
HEEATKFGKSSRILSACLYGGAPKGPQLRDIDRGVHVVVATPGRLNDILEMKRLNLDQVS
YLVLDEADRMLDMGFEPQIRKIVKEIPPTRQTLMYTATWPKEVRKIASDLLVKPVQVNIG
SIDELVANKAITQHVEVISHMQKRRRLEQILLSNGPSKYIVFCSTKRMCDQLAGYLDGPF
GASAIHGDKSQIERDRVLSEFRSGKSPILVATDVAARGLDIKDIRFVINYDFPTGVEDYV
HRIGRTGRAGATGVAYTFFCDQDSKHASDLVKVLEGADQQVPSELRDMASRGGYGTKFRR
WASDSSYGHNDHGSSQYRYCPERQDQDSKPQYKNDDHSNYGGNGGDSSGCNPSFSPGPAG
DDDGLGNGSRSRSRSPNHNSCKVAPGPDDAWTNAANSSW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatctgcgacggcggattcttcctcctcgtcaacaaaaggccgtatccgctac
gcgccggcggatcccacgctcccgaaaccttggcgaggcctcgtcgattccagcagtggt
tacctttacttttggaacccggaaactaatgtgacgcaatacgagaaacctcttccctct
tctcctcctcctcctatgccgcagcgtgaggattctccttctactgccaccaaggactct
gaaatctacgatggtgatcggctccaggagagcaatgcagcgagcctggactgctaccag
aatcaagagcccgggccagaaaaagttgacgatgagccaccgtacatgcagatatcacaa
gctaaccaagatgcgggagttggtttatctgcggaggcctatcgacgacgtcatgaaatt
actgtcattggagcaaatgttccaattccatacatcacatttgagtcgacaggttttcca
tcagagattctaagagagatcaatcaagcaggtttttctgcacctactccaatccaagca
caatcgtggccggttgctttgcagaatcgcgatattgtcgccgttgctaaaacaggttca
ggcaaaacattggggtatctcattccaggtttcattcatctcaagcgcctcagcaaagat
gctagaatgggcccgaccgttttggttttgtcaccaacaagagagttagctacacaaata
catgaagaagctactaagtttggaaagtcatcacgaattttaagtgcttgtttgtatggc
ggagctcctaaaggtcctcagttgagagatatagaccgaggagtccatgttgtggttgca
actccaggaaggttgaatgacatattagagatgaaaagattgaaccttgatcaagtttca
tacctggttcttgatgaggctgaccggatgctggacatgggttttgaaccacagatacgg
aaaattgtgaaagaaataccaccaacgcgccagactcttatgtacactgctacttggcct
aaggaagtccgaaaaattgcatcagatttacttgttaaacctgttcaggttaatattggc
agcattgatgaacttgttgctaataaagctattacgcagcatgtagaagttatttcacac
atgcagaagagacgtcgactggaacagattttgctttctaatgggccatcaaaatacata
gtattctgttctacgaagagaatgtgtgatcagctagctggttatcttgatggtccattt
ggtgcttctgcaattcatggcgacaagtctcagatagagcgtgatagggtactcagtgag
ttccgaagtgggaagtcacccattcttgtggcaactgatgttgcagcacgtggattggat
attaaggatatcaggtttgtgatcaactatgatttccccacaggtgttgaagactatgta
cacagaataggaagaactggtagagcaggcgcgactggagtagcttacacattcttttgt
gaccaggattccaagcatgcctcagatcttgttaaagtgttggaaggggccgatcaacaa
gttccttcagagctacgagatatggcatcccgtggtggttatggtacaaagttccggcgg
tgggcatcggactccagctatggccataatgatcatggctcctctcagtacagatattgt
ccagaacgtcaagatcaggacagtaaacctcagtataaaaacgacgatcatagcaactac
gggggaaatggaggcgacagcagtggctgcaaccctagtttcagtcctggccccgctggc
gacgacgatggattaggcaatggcagtcgtagtcgaagccgaagccctaatcacaacagt
tgtaaggttgcaccaggccccgatgatgcctggactaatgctgctaattcatcatggtag
DBGET
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