Dendrobium catenatum: 110102920
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Entry
110102920 CDS
T05027
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X3
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110102920
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110102920
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110102920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
Helicase_C
PHD
PHD_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110102920
NCBI-ProteinID:
XP_020687098
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGRKKNRPMRSGSLVSEVDDPQSSGVAEQSLVAEGLCTTAGENANFWKPFFIEIESCTST
FDEHFDVAEVSLDNVSFFDGFTNLLVEDSCVDGNFSLRFCLLGVEEGSLRLGNFPVLSAD
SILLEYIWLGRPDSNGCRETIILFSGQFDGPNECISGLVHLVLFKFLGLRLMLDSILPNN
SSARVRIEVMRSAFDACGYPLEVARQPWRRSMMSVMSWLRPEVVTSEFIYGIGQSEVIDD
YKCCESRSSGSRNRFEFNAAGFYEAIKPSKEEPNLESDLPDLLPCLRPYQQRAVYWMVSR
EKGSSAEKFEQFLLAPFSVPVMFLEGKSKMFYNPFNGNVSWRPLQFSYVSGGILADEMGL
GKTVELLACIFAHRKQSMDECITDDESEQMGSQIRRQKRERVECICGAASESRKYEGMWV
QCDICDAWQHADCVGFSSRKKSSISHDKKSSEMISHIKSKSQRNTKGNSYVIEMEGNFIC
SLCTELVEATKIKISTGATLVVCPAPIQAQWYSEILRHTRPGSLKIYIYEGARNITTTTA
LKSTMSELATADIVLTTYDVLKEDLSHDADRHDGDRHFLRFRKRYPVIPTLLTRIHWWRV
CLDEAQMVECNTASVTEMAMRLHAHHRWCITGTPIQHRLDDLFGLLRFLRASPFDAYRWW
VQVVRDPYEREDKVAMEFIHKMFKQIMWRSSKIHVSEELQLPPQEECLLWLTLSPVEEHF
YQKQHETCVRCAEEILRSFRSNSQGRECILGSESSCNSFLSHDEVAKLLWPLLKLRQACC
HPQVGSSGLCSLQNSPLTMEEILEVLIGKAKIEGEEALRRVAVALNGLAGLAVIEEDNER
AVSLYKEALVVADENSNDYRLDPLLSLHIHYNLAELLSLTSELSCPYMGNHSETNENKRD
VTGKYERHYVKRQKVGADCKPNSIKESLEKHAILNSSTVDDNVCEAKENRANNELPSRCY
AVGCLRKTCENIKQKYLSAFISKLSVAQQDFKSSYKEVCNLTKECKVQNMSWWVQALDII
EQKEDSSRELMKKIEQAISRVGCNSRSFKVSSGFRNMKGLRYTMQVGLDSLETSRQALIT
RLLQIDQTMEMPDNADVERKRYCPYCSGGDGNLCTHCELDFVFQKYEAKLFLLRKGNEIG
DIASVEEALDHQKRKYALNSFFRNGKDCSGLSVDNGERKQRHAKENIEVLRHPSELEITL
GVIRSYSKTILGRQDYALARRHLLLFEAMRREFTQARLLSRSQAQLLGAHDEIKLSTSRL
RLKETEDEPTAINILCREELIPCSLQFSSDKFASLSLLSRMKGQLRYLKGLVESKVEIKY
RSQFPSSRDHDGINMLNTTASDEIECHFKTEDDHCPICHEKMDSKKMVFECGHVICCKCC
LHLTEKVILHPGKCQNWLMCPTCRQRTVIEHVAYVDEKQNKDCGSRTPKALHAQDLNECS
IVVQGSYGTKIEAVTRRILWIKSTDQKAKVLVFSSWNDVLDVLQHALDSNNISYVRMKGG
RKSQAAIAQFKGEQPLKSKHIQVLLILIQHGSNGLNLLEAQHVILVEPLLNPAIEAQAIG
RVHRIGQEKKTFVHRFIVKNTVEESIYKLNLGRSGNSMVGTKANKKQDQPVLTVQDVESL
FPTSSMVENSSENFDDVNVAEQSLRHLPAAAAAGLAAERRFMTSHSNQQ
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaagaaaaatcggccaatgcgttctggttcccttgtatcagaagttgatgat
cctcagagcagtggtgtcgctgaacaaagtttagtggctgaaggtctctgtacgactgcc
ggagagaatgctaatttttggaagccattctttattgagattgagtcatgcacttcgaca
tttgatgagcattttgatgttgcagaagtatcacttgacaatgtgagtttttttgatgga
ttcactaatttactggtggaagatagttgtgtagacggtaatttttctcttcggttctgc
ttattgggtgtagaagaaggttcccttagattgggcaattttcctgtgctatcagctgat
agtattctattggagtacatttggttgggaagacctgactcaaatggttgcagagaaact
attattcttttctcgggacaatttgatggcccaaatgagtgtatttctggtcttgtgcac
ttggtgttatttaagtttctgggattaaggcttatgttggattccatacttcccaataat
tcatctgctagggtcaggattgaagttatgagaagtgcatttgatgcttgcgggtaccct
ttggaggttgcaagacagccttggagaagaagtatgatgagcgttatgtcttggttgcgc
cctgaagttgtgacatctgaatttatatatggaataggccaatcagaagtgatagatgat
tataaatgttgtgaatctagaagttctggttcaaggaaccgttttgagtttaatgctgct
ggcttttatgaagctattaaaccctcaaaagaagagccaaatttggaaagtgatcttcca
gatctacttccttgtcttagaccatatcaacaacgtgcggtttactggatggtttctaga
gagaagggatcatctgctgaaaagtttgagcaatttttgttagctccgttctccgttcct
gttatgttcttggaaggaaaatccaaaatgttctacaatccattcaatggaaatgtttca
tggcgtccattacaattctcatatgtttctggtggcatcttagcagatgagatgggcctt
gggaaaactgttgaattgttggcttgcatctttgcacatcggaagcaatccatggatgaa
tgcattactgatgatgaatccgaacagatgggaagccaaataagaagacagaaaagagaa
cgcgtggaatgtatttgtggtgctgccagtgagagtcgaaaatatgaaggaatgtgggta
caatgtgatatttgtgatgcatggcagcatgccgattgtgttggattttcttccaggaag
aaatcatctatttcccatgataagaagtcttctgaaatgatttcacatattaaatcgaag
tctcaacgaaatacaaagggaaatagctatgttatcgaaatggagggaaattttatatgc
tctttgtgcacagaacttgtggaagctaccaagattaagatatctactggtgcaaccctt
gtagtttgtccagctcctatacaggcacagtggtattctgagatactacgtcacacgaga
cctggttcgctgaaaatttacatctatgaaggtgctaggaacataacaacaacaaccgct
ctaaaatctaccatgagtgaactggcaacagctgatattgtcttaaccacatatgacgtc
ctaaaagaggatctatcgcatgatgctgaccggcatgatggtgatcgtcattttttgagg
ttccgaaagaggtatcctgttattcctactttacttacaaggatacattggtggagagtg
tgcctggatgaggctcagatggttgagtgcaacacagcatcggtaacagagatggcaatg
cgtttacatgctcaccatcgttggtgtatcacaggaactccaattcagcatcgacttgat
gatctgtttgggcttctgcgattccttagagctagtccttttgatgcctatagatggtgg
gttcaagttgtcagagatccatatgagagggaagacaaagtggccatggaattcatccac
aaaatgttcaagcaaattatgtggcgttcatctaagattcatgtgtcagaggaattgcag
ttacctccgcaggaagagtgtttgctgtggctgacattgtctcctgttgaagagcatttc
tatcagaagcagcatgaaacatgtgtaagatgtgcagaagaaatcctcagaagtttcaga
agtaatagtcaaggaagagaatgcattttgggttctgaaagttcatgcaatagctttctc
tctcatgatgaagttgcaaagcttctatggccacttttaaaacttcggcaggcatgttgc
catcctcaagttggaagttctggtctttgctcattgcaaaattctcctttgactatggaa
gagattcttgaagttcttattggcaaagcaaagattgaaggagaggaagctctcagaaga
gttgctgtggcactgaatggattagctgggttggctgtaatcgaggaagataatgagaga
gcagtttcactctacaaagaagcactggttgtagcggatgaaaacagtaatgattaccgt
ttggaccctttgttgagcctgcacattcattacaatctggctgaattgctttctctcact
tctgaactctcttgtccatacatgggaaaccattctgaaactaatgagaacaaaagggat
gttactggtaagtatgaacgacattacgttaagagacaaaaagttggtgcagactgcaaa
cctaattctatcaaagaatccttggagaagcatgccatcctaaattcatccactgtcgat
gataatgtatgcgaagctaaagagaacagagctaataatgaactgccatctaggtgctat
gcagttggttgtttgagaaaaacatgtgaaaatattaagcaaaagtacctgtctgctttt
atttcaaaattgtccgtagctcagcaggattttaaaagttcctataaggaggtttgcaat
ctgaccaaagagtgcaaagttcagaatatgagctggtgggtgcaggcacttgacattata
gaacagaaggaagactcatctcgtgaattgatgaaaaagattgaacaggctatttccagg
gttggttgcaactccagatcattcaaagtttcttcagggtttcgaaatatgaaaggtttg
agatacaccatgcaagttggtcttgattctttagagacttctagacaagctttaattacc
cgacttttgcaaattgatcaaactatggagatgccagataatgctgatgttgaacgcaag
agatattgcccttattgcagtggcggcgatggtaacttgtgcactcattgtgaattagat
ttcgtgtttcagaaatatgaggcgaagctgtttcttttgagaaaaggaaatgagattggt
gacattgcatcggttgaggaggcattggaccatcaaaaaaggaagtatgcattaaatagt
ttctttcgtaatggcaaggattgtagcggattgagtgttgataatggagaaagaaaacag
aggcacgccaaagaaaatattgaggttttgagacatccttcagaattggagattactcta
ggggtcattagaagttattcgaaaacaattttggggagacaagattatgcattagctaga
agacatttactactctttgaggccatgcgtagagaatttactcaagcaaggctattatca
cgttcgcaagctcagttattgggtgctcatgatgaaatcaagctgtctacctctagactg
cggctcaaggaaacagaggatgaaccaactgctataaatattctttgtagagaagaattg
attccttgtagcttgcaattttctagtgataagtttgcatctttgtctttgttatcacgc
atgaaagggcaacttcgctatctgaagggattggtggaatctaaagtggaaataaagtat
cgaagccaatttccatcttccagggatcacgatggaattaacatgttaaacactacagca
tctgatgaaatagaatgccatttcaagactgaagatgaccactgtcccatttgccatgaa
aaaatggacagcaagaagatggtatttgaatgtgggcatgttatttgctgtaaatgttgt
ttacacttgacagagaaagtaatccttcacccaggaaagtgccaaaattggcttatgtgt
ccaacttgtcgccaacgcacggtgatagagcatgttgcttatgttgatgagaaacaaaat
aaagattgtggctcaaggaccccaaaagctttacatgctcaagacttgaatgagtgttca
attgttgttcaaggatcttacggaacaaagattgaagctgttacaaggaggattttgtgg
ataaaatcaactgatcaaaaagctaaagtacttgttttctccagctggaatgatgtcctt
gatgtattgcagcatgcactggattctaataacatttcgtatgttcggatgaaaggtggc
aggaaatcacaagctgcgattgctcaatttaaaggagaacaacccttgaaatccaaacac
attcaagtccttctgatcctaatccagcatggatcgaacgggctgaatctcctggaagcc
caacatgtcatacttgtagaacctctcctaaatccagcgattgaagcccaagcaattggc
cgtgttcacagaattgggcaggaaaagaaaacatttgttcatcggtttatagtgaagaac
actgtggaggaaagcatatataagctgaatttgggtcggagtggaaattccatggttggt
actaaagctaataaaaaacaagatcaacctgtgctcacagtgcaagatgtagagagtttg
tttcctacttcttccatggtcgaaaattcgtcggaaaattttgacgatgtaaatgtagct
gaacaaagcctcaggcatttgcctgctgctgctgcagctggtcttgctgctgagaggaga
ttcatgacgtctcatagcaaccaacaatga
DBGET
integrated database retrieval system
