Dendrobium catenatum: 110103187
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Entry
110103187 CDS
T05027
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110103187
Enzymes [BR:
dct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110103187
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
90S particles
Helicases
110103187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110103187
NCBI-ProteinID:
XP_020687446
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MEEKPFRLFSSKSKPPVQTLPSTVHPTTSTTKTTHVDHGDPDPDASSTVSFADLGLSKWA
VDTCLELGMRRPTPVQRCCIPRILAGDDVLGIAQTGSGKTAAFALPILQRLATEPYGVFA
LVLTPTRELACQLAEQFRALGSSLQLRCTLVVGGMDMIGQARALVQRPHIVVATPGRIKT
LLCDDPDIPAAFSRTKFLVLDEADRVLDVGFEEELRVILKNLPKSRQTLLFSATMTSDLQ
TLLEISSNRSYFFEAYEGFKTVESLKQLYIFIPKNVKEVYLIHILSKMEDMGIRSVMIFL
STCRGCHFLSLLLEELDQPAVALHSHKSQVLRLSALNKFKSGQVPILLATDVASRGLDIP
TVDLVINYDIPRYPRDYVHRVGRTARAGRGGLALSFITQNDVELIHEIENVVGKQMTAFE
CKEKEVLEDITKVYKARRVARMKMIDDGFEEKAEERKAQKMKALAEKGLLKKRKHKPKE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaccattccgtctattctccagcaaatcgaagcctcctgtgcaaactcta
ccctccaccgtgcaccctacaacgtcaactacaaaaaccacccatgtcgatcacggggat
ccagacccggacgcatccagcaccgtcagctttgccgacctcggcctttcaaagtgggct
gttgacacttgcctagagcttggaatgcggcgaccaactcccgtgcagcgctgctgcatc
ccacgtatacttgctggcgatgacgttctcggcatagctcagactgggagcggcaagacg
gctgccttcgctttgccgatcctccaacgcctcgctacggagccctacggtgtgtttgcc
cttgttcttacccccacacgcgagcttgcgtgccagctcgcggagcagttccgtgcactc
ggatcgtcactgcaactgaggtgcacgctggttgttggcgggatggacatgattggccaa
gcgcgcgctcttgtgcagcggccgcatatagttgttgcgacccctgggaggatcaagact
cttctgtgcgatgatccagacattccagcagcattctctaggaccaagtttctggttctt
gatgaggctgacagagttttggatgttggctttgaggaggaactgagggtaattttgaag
aatttgcctaaaagtaggcagactcttttattttctgcaaccatgacaagcgatctgcaa
acattgcttgagatatcttcaaatagatcttacttttttgaggcatatgaaggttttaaa
acggtggaatctctcaaacaactatacatttttattcctaaaaatgtgaaggaggtctat
cttatccacatactgtcaaaaatggaggatatgggcattagatcggtcatgatattcctt
tctacatgcaggggctgtcattttttaagcttgttattggaagaacttgatcagcctgca
gttgctttgcactctcacaagtctcaggtcctccgtctctctgcattgaataaatttaaa
tctggccaagttcctattttgcttgctacggatgtagctagccgaggcttggatattcca
acagtagatcttgtcatcaactatgatattcctaggtatccacgggactacgtacaccgt
gtgggccgtactgccagggcaggcagaggaggccttgccctaagtttcataacacagaat
gatgttgaactcattcacgagattgagaatgttgttggaaaacaaatgactgcatttgaa
tgtaaagagaaggaggtgcttgaggatatcactaaggtatacaaagccaggcgtgttgct
agaatgaagatgattgatgatggatttgaagaaaaagctgaagaaagaaaagcacagaag
atgaaggcattagcagagaaagggttgctgaagaaaaggaaacataaacctaaagaatga
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