KEGG   Dendrobium catenatum: 110103357
Entry
110103357         CDS       T05027                                 
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
dct  Dendrobium catenatum
Pathway
dct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110103357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110103357
Enzymes [BR:dct01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     110103357
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     110103357
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 110103357
NCBI-ProteinID: XP_028555298
LinkDB
Position
Unknown
AA seq 241 aa
VIDFISSSHNTIVSHNCLHDFTFIHEKFLGPLPETMSEFLCWLKLLFSDVIDLNYLLKEF
GPLKKEKNIPSALSYLKRQYFVPIELEVPKQAEDGNKSHGNNTEYVVKNAPSSRSALEPT
RSIEDHTNIFNPATLTLHEPGDHGKTGWRIGTNRRVSTDNILFLWGFGGATSAVELKHRL
LQIHPIFAEDFDVHFVDKTCAVVVFEKLGSAETLLKDMGLVDNVFGVLRDVVVEGLRGCR
I
NT seq 726 nt   +upstreamnt  +downstreamnt
gtcattgatttcatctcaagttctcacaatacaattgtttcccacaactgcctccatgat
tttaccttcattcatgagaagtttctcggtccgttacctgaaacgatgtcagaattcttg
tgctggttgaaattgttattctccgatgtaattgatcttaattatttgttgaaggagttt
ggacctttaaagaaagaaaaaaatatccctagtgccctgagttatttaaaaaggcagtat
tttgtaccaatagaacttgaagttcctaagcaagctgaagatgggaacaagagccatgga
aacaatactgaatatgttgttaagaacgctccttcaagccgatctgcactcgagcccacc
agatcaattgaagatcatacaaacattttcaatccagcaaccctaacacttcatgaacct
ggtgatcatggtaagactggttggcgaattggtactaacaggagagtaagcacagataac
atactcttcctatggggctttggtggtgcaacttctgctgtggagctaaaacatcgtctc
ttgcaaattcatccaatttttgcagaagattttgatgttcactttgtcgataagacctgc
gctgttgttgtttttgagaagttaggttctgctgagacattacttaaagacatgggttta
gttgacaatgtttttggtgttttaagagacgttgttgtggaagggttgaggggctgcagg
atatga

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