Dendrobium catenatum: 110103391
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Entry
110103391 CDS
T05027
Name
(RefSeq) protein PAT1 homolog 2 isoform X2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110103391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110103391
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110103391
mRNA degradation factors
5'-3' decay
Decapping complex
110103391
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
110103391
NCBI-ProteinID:
XP_020687742
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MRRVDGVGGVFGSPNHDGDLKEFGDAAPGKDPRFDASQYAFFGQDVLGEVDDSALIGNLA
DDEYTFSSLGDGEEGEVLCSSYDDDLATTFAKLNRTVSEPKSAGVIGDRRGSHSRESSST
VDWTQESDFSNWLDQQILDAENIQDGKRWWSQPSSRPSDSKLLYRTSTYPQQPRLQQQLS
EPIFVPKSSFISLPSSGQSQPSPHQPYILSHTTGRQLPFSGQNLSPSSASLHLTGLPRDF
PHAHFAPSDLSIKRGPPNHWMNQVSRSSGDNSTTVPGLFQQQLHHQNEFMPSQLLTHQQQ
LMVHLRPSLSHLSQLQSHLFRSHPSPSMMNENRFDAIHGMSEQREPHRSKQSKGKQSMRH
QHSSDTLNQKIHGVSLQFRSKYMSAEEIESILRIQHAATHHNDPYIDDYYHMACSAKKSI
GSMLKHHFYPSFIRDIPSRTRSINEPHAYHQVNVLQRIPFSFIRRPRPLLEGEPPATHGE
EILEQRTSVKPLDQEPMFAARITIEDCMCLLLDVDDIDRILQFGQSQDSGSQLKRRRQVY
LEGIAASLQFVDPLGTSKAGYSVGLTTKDDLVFLRLISLPKGRKLISRFLQLLYPGSELT
RIVCMAIFRHLRFLFGRLPSDPSAIETTINLARTVSSCVQGMDLNAISACLAAIVCSSEQ
PPLRPLGSSAGDGASIIIKFVLDRATYLLTDPHTSSKHSMPNRALWQASFDAFFVLLTKY
SLSKYDGILQSLLMQSHGATLLQSDLNRAISKEMPVELLRASLPHTDELQRKQLIDFVQR
CIPVIGYSTHGDTGSFKGESERVTSFGTQQVHSRGIQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagttgacggggtgggtggggttttcggaagccctaaccacgatggggatctc
aaggagtttggtgatgcagccccaggtaaagatcctcgttttgatgcttcacaatatgca
ttttttggccaggatgttttaggagaagttgatgattccgcactaattgggaatcttgct
gatgatgaatatactttttcttctttaggagatggagaagagggtgaagttttgtgttcg
tcatacgatgatgatcttgcaaccacattcgcgaagttgaacagaactgttagtgaacca
aagagtgcaggcgttattggtgatagaagagggtcccattctagagaaagttcttccact
gtagactggacacaggaatcagacttttcaaactggttagatcagcagatattagatgct
gaaaatattcaagatggtaaaagatggtggtcgcaaccttcatcccggccatccgactcc
aagttattgtacagaacatctacttaccctcaacaaccgcggctacaacaacaattgagt
gaaccaatttttgtacccaaatcatccttcatatcactcccctctagtggtcaatcacag
ccttcaccacatcagccatacatactctcacataccactggccgccaactgcctttctct
ggacaaaatctctcaccctcttctgcatcacttcatttaactggacttcctcgtgatttt
ccacatgctcactttgctccttcagatctttccattaaacgtgggcctcctaatcactgg
atgaatcaagtttctcgttcttcaggggacaattccaccacagtaccggggctgtttcaa
caacagcttcatcatcaaaacgagtttatgccttcacaacttttaacacatcagcaacaa
ctgatggttcatctccgcccatctctgtcccatctttcccaattacagtctcatttgttc
agatctcatccttccccctctatgatgaacgaaaatagatttgatgcaattcatggcatg
tctgaacagagagaaccacataggtcaaaacaatcaaaaggaaaacaaagcatgcgacat
caacacagttctgacactctcaaccagaagatccatggcgtttcattgcagtttagatca
aaatacatgtctgcagaagaaattgaaagcattttgagaattcaacatgctgcaacacac
cacaatgatccctacattgatgactactatcatatggcctgctcagcaaagaaatctatt
ggttcaatgctgaagcatcatttttatccatcatttatcagagacattccttctcgaaca
cgttcaattaatgagccccatgcttatcatcaagttaatgtgctccagaggatcccattt
tctttcatccgtaggccacgcccccttcttgaaggtgaaccaccagccactcatggtgaa
gaaatcctcgaacagagaacttctgttaagccccttgaccaagagccaatgtttgctgcc
agaatcaccattgaagattgtatgtgtcttcttcttgatgtggatgatattgatcgcatt
ttacagtttggccaatcacaagatagtggctcccaactcaagcggaggcggcaagtctat
cttgaaggtattgcagcatcacttcagtttgttgatccacttggaaccagtaaagctggt
tactcagttggacttactacaaaggatgatcttgtgttccttcggttaatctctcttcct
aaaggtcgcaagctgatctcacgcttccttcagcttctttatcctggaagtgagcttact
cgcatagtttgcatggccatctttcgccatctgaggtttttatttggtcgcttgccctct
gatccaagcgccattgaaacaacaataaatcttgctcgaaccgtctcttcatgcgtgcaa
ggcatggatcttaatgcaataagtgcttgccttgctgctattgtttgttcgtcagagcag
ccacctctccgtcctctcggaagttctgccggtgatggagcctctattataattaaattt
gttcttgacagagcaacctacctccttactgaccctcatacttccagcaagcatagcatg
cccaatagggctctatggcaggcatcttttgatgccttctttgtccttctcacaaaatac
agcctaagcaaatatgacggcattttgcaatcattgctcatgcagtcacatggtgctacc
ttacttcaatctgatttaaacagggctataagcaaagaaatgccagtagagctcttgcgt
gcaagtcttccccatacagatgagctccagcgtaagcagttaattgattttgttcaaagg
tgtattcctgtcattggatacagcacccatggagacaccggatctttcaaaggtgaatca
gagcgcgtcacgtcatttggtacacaacaggtgcatagccgcggtatacagtaa
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