Dendrobium catenatum: 110103546
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Entry
110103546 CDS
T05027
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
dct
Dendrobium catenatum
Pathway
dct04120
Ubiquitin mediated proteolysis
dct04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110103546
04120 Ubiquitin mediated proteolysis
110103546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110103546
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110103546
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
U-box type E3
110103546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
110103546
NCBI-ProteinID:
XP_020687969
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MSTAKPQRSLAEIEDIILRKIFLVSLSRPTQNEPKIAYLEMTAAEILSEGKPLLLSRETM
ERVLIDRLSGDFPAADTPFFYLVGCFRRAGDEIRKVASMKDPSVRSEIESAIKQAKRLFV
SYCRIHVGNPDMFAAGKPAASELLDLIFSEVASPMDGVNSLGSGISCPPGFLDEFFSEGD
AESLGPVMNEVYELLRATVERVSALGNFQQPLRALQLLVRYPECAKALVNHPNWIPNQSY
FFMGDGRVMEFKSILGAFLHVSALPDYKDFKSTPDVGQQCFSESSTRRPADLSSSFTTIR
TVMNILYDGLGEVILTLLKNIDTRDKVLDYIAAMIVKNSARSGMQVNPLSCASSGSFVNL
SAVMLRLSEPFLDANASKRDKIDPKYVFFNNRVDLRQLTAIHASSEEVVSFMENLKRIEE
EEKGENRVLQSFEASTSGNSSGSYASPSTNVTKSSTGKNKYSFICECFFMTARVLNLGLM
KALSDFKRIVQELARFEEDLSTFREMREQGASPQLENDISRLEKAVEKLSQEKFCYEAQI
LRDGALLQQALSFNRLVVIWLVSLVGGFKMPLPRECPMVFACMPEHFIEDAMDLLVLTSR
IPKALDGFLLEDFLNFIIMFMASPSYVKNPYLRAKMVEVLNCWMPQRSGVSSTASLFEGH
TLSLDYLLRNLLKVYVDIEFTGSHNQFFDKFRIRHNIAELLEYLWNVPSHRNAWRKIAKE
EEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMSNSIEWERRPAQEREERMRQFH
SQENIIRFDMKLANEDVGMLAFTSEQIPSPFLLPEMVERVASMLNYFLLQLVGPKRKSLI
VKDPEKYEFRPKQLLKQIAEIYVHIARGDHENVFPAALSMDGRAYNGNLFTAAADILWKI
GEDSKVIKEFVHLGEKAKAAASEAMDAEAALGDIPEEFLDPIQYTLMNDPVILPSSKVTI
DRPVIQRHLLSDNTDPFNRSHLTQDMLIPNVELKARIEGFIKSQGSRNQS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgcgaagcctcagcgatcccttgcagagattgaggacatcatcctccgcaag
atcttccttgtctccctctcccgacccacccaaaacgaacctaagattgcttacctcgag
atgacggccgccgagatcctcagcgaaggcaaaccccttctcctttcccgcgagaccatg
gaacgcgtcctcatcgatcgcctctccggcgatttcccggcagccgatactcctttcttc
taccttgttggctgctttcgccgcgcgggggacgagatccgaaaggtagcatcaatgaag
gatccctccgttcgatccgagatcgagtcggctatcaagcaagcaaagagattattcgtc
tcatactgccgtattcatgtcggcaatccggatatgttcgctgctgggaagcccgcggca
tccgaactgcttgatttgatattttcggaggtggcttctcccatggatggcgtcaatagc
ttgggatcagggatcagttgtcctcctggatttttggatgagttcttcagcgaaggggat
gccgagagcttgggaccagttatgaacgaggtgtatgagttgctgagggcaaccgtggag
agagtatcggctcttggtaactttcaacagccgctaagggctttgcagcttcttgttagg
tatcccgaatgcgctaaggctctggtaaatcatccgaattggataccaaaccagtcatac
ttctttatgggagatggaagggttatggagttcaagagcatattaggggctttccttcat
gtcagtgccttgcctgattacaaagattttaagagcacaccggacgttggacaacaatgc
ttctctgaatcatcaactcgtcggccagctgatctttcatcatctttcacaacaattaga
actgttatgaatattctttatgatggtctaggagaagtaatccttaccctccttaaaaat
attgacacacgagataaagttctcgattatattgcagccatgattgtgaaaaattcagct
aggtctggtatgcaggttaatccattgtcttgtgctagttctggttcatttgtcaatcta
agtgcagtcatgcttcgactctctgaaccttttttggatgcaaatgcatcaaagagagac
aaaattgatccaaaatatgtgttcttcaataatcgtgtagatttgagacaattgacagct
atacatgcatcatctgaagaggttgtttcattcatggaaaatctcaagaggattgaagag
gaagaaaaaggggagaaccgtgtgttgcaatcctttgaagcgtcaacctctggcaatagt
agtggaagctatgcctctccaagcaccaacgtaacaaagagttctactggaaagaataaa
tactcttttatttgtgagtgtttctttatgactgcaagagttcttaatttgggactgatg
aaggcactatcggacttcaaacgtatagttcaggagctggcaaggtttgaagaggatctc
tctacatttagagaaatgagagaacaaggagctagtccacaacttgagaacgatataagt
cgcttggagaaagcagttgagaagttatcacaggaaaagttctgttatgaagcccaaata
ttgcgagacggagctctacttcagcaagcactatctttcaataggttagtggtcatatgg
ttggttagtcttgttggtggcttcaaaatgcctctgccaagagagtgtccaatggtattt
gcatgcatgccagaacatttcattgaagatgctatggatttactcgtcttaacttctcga
attccaaaagcccttgatgggtttttgctggaggacttcttaaactttataatcatgttc
atggctagtccatcttatgtaaaaaatccatatctgagagcaaagatggtcgaagtgctg
aattgctggatgccacaacgaagtggggtttcttccacagcttcgcttttcgaaggacac
acgttatctcttgattatctactcaggaatctcctaaaagtgtatgtagatattgagttt
actggttctcataatcagttctttgataaatttagaattcgccataacattgctgagcta
ttagagtatttatggaatgtccctagccatcgcaatgcgtggaggaagatagctaaagaa
gaagagaagggtgtctacctgaattttttgaactttcttatcaatgatagtatctatctt
ctagatgagagtttaaacaaaattcttgaacttaaagaaatagaagcagaaatgtccaat
tctattgaatgggaaaggagaccagctcaagaaagggaagaaagaatgcgtcaattccat
tctcaagaaaatattattcgcttcgacatgaagctggcaaatgaagatgtgggaatgctt
gcgttcacgtccgaacaaattccatctcctttccttcttccagaaatggtggaaagagtg
gctagtatgctaaattattttctgttacaacttgttggacctaagaggaagtctcttatt
gtaaaagatccagaaaaatatgagttcagaccaaagcagcttctaaagcaaattgctgag
atttatgttcacattgcaagaggagaccacgaaaatgtgtttccagctgcattatcgatg
gatgggcgagcatacaatggaaatttgtttactgccgctgctgatattttgtggaaaatt
ggggaagacagcaaagttatcaaggaatttgttcatcttggtgagaaagctaaagctgct
gcttctgaagcaatggatgctgaggcggcccttggtgacataccagaagaattccttgac
cctattcagtacaccctgatgaacgatccagtaattttaccatcatcaaaggtcacaatt
gatcgacctgtaatccaaagacaccttcttagtgataataccgatccatttaaccgatct
catctgactcaagacatgttgatacccaatgtggagcttaaggcaagaatagaaggattc
atcaaatcccaaggttcaaggaatcaaagctga
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