Dendrobium catenatum: 110103855
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Entry
110103855 CDS
T05027
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
dct
Dendrobium catenatum
Pathway
dct03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110103855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dct03041
]
110103855
Spliceosome [BR:
dct03041
]
Complex A
Other components
Complex A specific factors
110103855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
110103855
NCBI-ProteinID:
XP_020688376
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSTKVDSPSSVEARQAPISASTTVSSSSPKVSMFGTKAGFVIPKNKLSGSLVPIFRGGSK
IDTASVVKEESTKQVQRKTKWGTDLTQDANVRKGKALAYQTRVEQITQQLKSGSLEFEED
QGSESPKLVSNANSDSKARKVQPLELERRELIGEILRLNPSYKAPPDYKPLMKESKVLIP
IRTYPGYNFVGLLLGPESNTQKRLEEETGAKVRVYGTKSGFGEKSEITKSDISNSQETYD
DLHVHVSADTYEKVDAAVALIELLLTPVSGNAGVTPKVASEDVQTKNLDSSGIFMTPVNN
VIQAVPQSPSLPVQPGQSPFQPYPAPWFPTTTPNVPSNPSSAFMPPLFPNNPTQFPLLRP
PPGIPQYFTQAPNILSVPRTSTPTVLRPPLPIQLPPNQPPSGPISQSLTSRPVPTLKPPG
QVNPLIGPPIRPPVTSSAWPLAPNPSGPSINQVAPSNATMRALGVPSASMSSGPSQFNVS
DIARPPAANFTPHSSSLISARLSTNPPIFSPVPSQTGLVPTPGMASSFSGSLASPPPAQR
PTSFLQRAPSAPVMTSPSPLIVRAPIPMPAPPHAQAPIPVQPRLQPPQPLPPLSTSNATI
IPTFPPSANSPIGASPVTTLKPPRPISGDFTFQPLRTQPPPSSPNTPAAHNSALQNSPQA
PFAAPKAPSFRPALQSPIPAALPQSSPRLPAAPTAFPANASNIRPPSHMLQGYPSPAPVQ
PVAQAVPVGSPRFPSAAQAPNPSGGSMPAYPENFHRLPLVSRPAGSFTVPNQPLADKPIG
FTPGNVHTSPGGNQIYDPFSPTASAAPPQQGASKKPETDAEYEDLMASVGVK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaaagttgactcgccatcttctgtcgaagctcgtcaagctccaatttctgct
tcaactacagtttcatccagtagccccaaggtttccatgtttgggacaaaagccggattt
gtcataccaaagaataaattgtcaggttccttggttcccattttccgtggtgggagcaaa
atagatactgcaagtgttgtcaaggaagagagcacaaaacaagtccaacgaaaaacaaaa
tggggtacggatcttacacaagatgctaatgttcgaaagggaaaagctttagcttatcag
actagagtggagcagatcactcagcagctgaagtctggatctctggaatttgaagaagat
caaggttctgagtcaccaaagctggtttccaatgctaattcagatagcaaggctcgcaag
gttcagcctctggaattggaacgaagggaacttattggcgaaatattacggttaaatccc
agttacaaggctccaccagattacaagccactaatgaaggagtctaaagttctaattcca
attagaacatatccaggctacaactttgttggcttgttattggggcctgaaagcaacaca
caaaaaagacttgaagaagaaactggagctaaagtacgagtttatggaactaaatctggc
ttcggggagaagagtgaaataaccaagtcagacattagtaattctcaggagacgtacgat
gaccttcatgtccatgtttcagcagatacatatgagaaggttgatgcagcagtagcgctg
attgagcttctactcactccagtatctggaaatgctggagtcactccaaaagttgcgagt
gaggatgttcaaaccaaaaatctggactcatctggtatttttatgacgcctgtgaacaat
gttattcaagctgtacctcaatctccgtctctgcctgttcagcctggccaatcaccattt
caaccataccctgctccctggttcccaacaaccacaccaaatgttccttctaatccatct
tctgctttcatgcctccactttttcccaacaatcctacccagtttccacttttaaggcct
cctcctggcatccctcagtatttcactcaagctcctaatatcctctcagttccaagaaca
tcaacgccgactgtcttaaggcccccattacctattcaattgcctccaaaccaaccccct
tcaggccccatctcacagtcattgacctctcgcccagtgccaactttaaagccacctgga
caagtaaacccgctgattggacccccaattagaccaccagtaacttcttctgcctggccc
cttgctccaaatccttcagggccaagcattaatcaggtggctccttcaaatgcaacaatg
agggctttgggtgttccttcagcttccatgagctctgggccttctcaatttaacgtttct
gatattgcaaggcctcccgctgcaaattttacccctcactcatcttctctcatttccgcc
cgactttccacaaatccacctattttttcgccggtgccttcgcagaccggacttgttcca
actccaggaatggcttcatcattctcaggatcattggcttcaccaccaccagctcaacgt
ccaacttctttcctgcagagagctccttctgccccggtaatgacttcaccttccccttta
atagtccgggctcctatcccaatgccagcaccgcctcatgcacaagctcctatacccgtg
caaccacggttgcagccacctcagccactgccacctctatccacttccaatgcaaccatc
attcctactttccctccttcagcaaacagtcctattggtgcttcccctgttacaactctc
aaaccaccgcgccccatttccggcgattttacttttcagcctctccgaactcaaccacca
ccatcttccccaaacactccggcagctcacaattctgcactacagaactcaccacaggct
ccatttgcagcgccaaaagcaccatcctttcgaccagctttacaaagtcccattcctgca
gcccttcctcaaagttctcctaggcttccagctgctcctactgcttttccagccaatgca
agcaacattagaccaccatctcacatgcttcaaggatacccaagcccagctcctgtacag
ccagtggcccaagctgttccagttggctcaccacgctttcctagtgctgcccaagctcca
aatccttcaggaggctccatgcctgcttatcctgaaaattttcatcgattgcctcttgtt
agtagacctgcaggaagttttactgtaccaaaccaaccgctagcggataaaccaatcggc
tttacgcccggaaatgtacacacaagtcctggaggcaatcagatttatgatccattttca
ccaacagcttcagcagcacctccacaacagggagccagtaaaaaaccagagacagatgct
gaatatgaagatctaatggcctctgtgggagtaaagtga
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