Dendrobium catenatum: 110104044
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Entry
110104044 CDS
T05027
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110104044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110104044
03036 Chromosome and associated proteins [BR:
dct03036
]
110104044
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110104044
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110104044
PBAF complex
110104044
GBAF(ncBAF) complex
110104044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110104044
NCBI-ProteinID:
XP_020688643
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MEAQPPSVQSASSSPSPVPVPVPVPVPVPATANPAQPSQLSQTPAASPVKSEIPARESNE
SLPAAVSCLPDTPPPVSYTITIPSCSGWFSWDQIHETEKRILPEFFDERSSSKNPGVYKY
YRDSIIGRFRANPSRKITFTEARRGLVGDVGSVRRVFDFLEAWGLINYTPSVKPLPKEKK
EVGDTAERKDSSKRLCSNCKSLCNIVCFVTDKADITLCARCFVRGNYRAGLNSADFKRVD
ISEETKTEWTDKETLHLLEAILHYGEDWKKVAEHVGSRSEKDCVARFIKLPFGEQFLGPS
EFTENDKVDAEPSGYNIAELSLSKRRRLTPLADASNPIIAQVAFLAAMAGPEVAETASKA
AVAALSEFELSSINNGNDGNIGLNNQEIEEANDQTHQVYKDAAAEAQSQLNKEQQDIEQS
ISGIIEVQMKEIQDKLVHFEELELLMEKEWQQLKYMKDLLFADQLTILQQKPRLMPQKL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaaccaccatccgtccaatctgcatcctcctcgccgtcgccggtgccggtt
ccggtgccggtgccggtgccggtgccggcgacggcgaacccagcccagccttcacaactc
tcccaaacacctgcggcatcccctgtgaaatccgagattccagcacgcgaatcgaacgaa
tcactccctgccgcggtctcctgtcttccagataccccgccgccagtatcgtataccatc
acaatacccagttgctccggttggttttcctgggatcaaattcacgagacagagaagaga
atccttccggagtttttcgatgagagatcgtcttccaagaaccctggcgtctacaagtat
tacagggattctattattggacgttttagagcgaacccttcgaggaagatcactttcacg
gaagcccggcgcgggctggttggcgacgtcggatccgtacgaagggtttttgatttcctg
gaggcgtggggtttgatcaattacacgccttccgtgaagccactgcccaaggagaaaaaa
gaggtgggggatacggcggagaggaaggatagctctaagaggctttgcagcaattgcaaa
tcgctctgcaacattgtttgctttgtgacggacaaggcagatataactctctgcgcaagg
tgttttgtccgtggcaattatcgtgctggtcttaattcagcagattttaaacgtgttgat
attagtgaagaaacaaagacagagtggacagacaaagagacccttcatcttcttgaagcc
attttgcattatggtgaagattggaaaaaggtggcagaacatgttggtagtagaagtgaa
aaagattgtgttgctaggttcatcaagttgccatttggggagcagttcttggggccttct
gagtttactgaaaatgacaaggttgatgctgagcctagtggctataatattgcagagtta
agtctctcaaaaagaaggcgtttaacacctttagctgatgcaagcaaccccatcatagct
caggtggcttttttagctgctatggccggccctgaagtagctgaaactgcatctaaagct
gctgttgctgctttaagtgagtttgaactttccagcatcaacaatggcaatgatggaaat
attggtttgaacaatcaagaaattgaggaagcaaatgatcagactcaccaagtttacaaa
gacgctgctgctgaagcacagtcgcagcttaataaggagcagcaagatatagaacaatca
atatcaggcattattgaagtccagatgaaggaaatccaagataaactagtacattttgag
gagttagagctattgatggagaaagagtggcaacagttgaaatatatgaaggatcttctc
tttgctgatcagctcaccattctgcaacagaagcctagactaatgccacagaaactttag
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