Dendrobium catenatum: 110104170
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Entry
110104170 CDS
T05027
Name
(RefSeq) uncharacterized protein LOC110104170 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110104170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110104170
03019 Messenger RNA biogenesis [BR:
dct03019
]
110104170
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110104170
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110104170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
110104170
NCBI-ProteinID:
XP_020688815
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MLPFLPPFPNQNQVQGGNDPSPNQFQISSSAALPNQFGFNNPQILMPAMRGFNNQNAVLG
TLLAQHQLMQGLQNNFMGALLQQGIMPQFNGQQLNLLGALQSPNFMSLQQAGLLGRPPMG
QNMNQMMGFSPNGLLCSQNPIFPPNSRLPLINSGNSNPGFLGNDNTHVGQSLSSSTGLET
QIANQTLQKPILPSPLQDNKSNERQWPQLKHGQAGGKYFSSNSSENVASNNFKPKFNDQW
KRKSSHMRLQKSQSYNSRNTWQKERPFTRNNQRGHRKRKEKNTNFSESSDNISTMRKRPL
SVVYSESEIQQWREARKKNFPTRTNIEKKLSPSKEDIDSRAKVRRQQLKEVLAKQAELGV
EVAEIPSIYLTEPEDQASKNVNVSEALNTNIETKCKLSTSKKRGRFRSNKRNAKRLKFRN
EAALSHEPVVKRREPTLLRKLLNGDIRHDKCQLLQAFRFMVLNTFFNGVPDKPLLFPIVT
TKDGVLEPEVFLEKKPFQDRIDSEANLLAKNGSDEEVETAKYSTVVGAVKGECDEDNDFD
DASDVVCETIGEDFILHDGDKSEEGEITN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttccttcctccctttccaaaccaaaatcaggtgcaaggaggaaacgatcca
tctcccaatcagttccagatatcctcaagcgctgccctgcccaaccaattcggcttcaat
aatcctcagattttgatgccagcgatgagaggctttaacaaccagaacgctgttttgggc
actttgcttgctcagcatcagctgatgcaggggctgcaaaataattttatgggcgcgctt
ttacaacagggcattatgccccaattcaatgggcagcaacttaatcttcttggtgctctc
caaagcccaaacttcatgtctttacaacaagcaggacttttaggcaggccgcctatgggt
cagaatatgaaccagatgatgggattttcaccaaatggattgctatgctcgcaaaaccct
atctttcctccaaattctcggttaccactgataaactctggtaattccaatcctggattc
ttgggaaatgacaacacacatgttgggcagagtttaagtagttcgacaggtctggaaact
cagatagccaaccagacattacaaaaaccaatcttgccaagtccacttcaggataataaa
tccaacgaacggcagtggcctcagttgaagcacggtcaagctggtggaaagtatttttca
agtaactcctctgagaatgttgctagcaataatttcaagccaaaatttaatgaccaatgg
aagaggaagtcatcacatatgagactccaaaaatctcagtcatacaattcaagaaatact
tggcaaaaggagagaccatttaccagaaataatcaaagaggacatcgcaagaggaaagag
aaaaatactaatttctcagagagcagcgataatatatctacaatgcgtaagaggcccctt
tctgtagtatacagtgaaagtgaaatccagcagtggcgtgaggcacgcaagaagaatttc
cctaccagaactaacattgagaagaagctgagcccaagcaaggaagacatagattcacgt
gctaaagtacgccggcagcaactaaaggaagttctagcaaaacaggcagaactcggagtt
gaagtcgctgaaataccttcaatctaccttactgaaccagaagatcaagcatcgaaaaat
gtgaatgttagtgaagcattaaatacaaatattgaaactaaatgcaaactttcaactagc
aaaaagagaggtaggttccgaagcaataagagaaatgccaaaaggctgaagtttaggaat
gaggcagccctttctcatgaaccagttgtcaagaggagggaaccaacccttctgcggaag
cttctgaatggtgatataaggcacgataagtgtcaattactgcaagctttcagattcatg
gttcttaatactttcttcaatggagtgcctgataagcctttgttattcccaatagtcaca
acaaaagatggtgtgcttgagccagaggtgtttctggagaagaaaccatttcaagatagg
atagattctgaagctaatttactagccaagaatggaagtgatgaagaggttgagacagca
aaatattcaactgtagttggagctgtaaagggggagtgtgatgaggataatgactttgat
gatgctagtgatgtagtatgtgaaactattggcgaggatttcatcttacatgatggtgat
aaatctgaggaaggagagatcactaattag
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