Dendrobium catenatum: 110104178
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Entry
110104178 CDS
T05027
Name
(RefSeq) putative vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110104178
Membrane trafficking [BR:
dct04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110104178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
PH
Motif
Other DBs
NCBI-GeneID:
110104178
NCBI-ProteinID:
XP_028547735
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MLEDQVAFLLQKYLGNYVRGLNKEALKISVWRGDVELTNMQLKPEALNALKLPVKVKAGF
LGSVRLKVPWSKLGQEPVLVYLDRIFLLAEPSTQIEGCSEYAIQEAKKTRLRDLEMKLLE
QQQQLKSEMNTSWLGSVISTIIGNLKLSITNIHVRYEDLESNPGHPFAAGLTLSRLSAVT
VDESGKETFATGGALEHIQKSVQLDRLAFYFDSDISPWHIEKSWEDLLPSEWSQIFELGV
GKAQSFSDDPREHDYILQPVTGNAKYTKLRIDESKTSGQALQQAVINLDDVTLCLSKDGF
RDILKLADNFAAFNQRLKYAHYRPQVPVKSDPRAWWTYAYKVVTDEMKKASGKLSWEDVL
RYASIRKRYLSLYASLLKSDLTRLVVDDNEEIDKLDRELDIDVILQWRMLAHKFVEQSVE
SDVYQNKKKVKQSWWSFGWSASGKDDSGSKGFTDEDWERLNKIIGYKDGSDENLVTSQET
DLPQLFMEIHMKHNASKLIADGQECLADLSCEGLACSLKTYSETKVFDFKLESYRLLSPN
GLLAESAYTADSFVGVFTYKPFDAEVDWSFVAKASPCYMTYLKDSIDQIISFFKSNTAVT
QTLALETAAAVQMTIDGVRRTAQQQVTQALRDRSRFLIDLDISAPKITIPTDFYPDDHHA
TKLLLDLGNLMLCTQDYWNGDSSEENAMYLQFSLILSDMSAFLVDGDYNWKETLSDISSS
QAQICNFYPVLDKCGIALKLQQIHSESPFFPSMRLAARLPSLGFHVSPARYHRLIHVAKV
FQDEGSSPDAPRPWSQADFEGWLSILTWKGVGNREAVWQRRYLCLVGPFLYVLENPESPS
YKQYISLRSKQVHQVPKEFTGDSQNMIAVYDAAQSNLKVEDASALVLLCDSDESRKTWQN
RLQGAIYRASGSASITGFTEMSSTTDVTTPKSSDSKIFPDVWNMEKIFFTGVLDELRVCF
SSNYESNLNFKKVLLGNESQLFEFRALGGQVELSVREKVIYMGTLLKSLEILDKYQLAGV
ALPRYLARSFIKNTNQAMRDNDQLNQADNEDKFFEASDELDDVGLYPTQRSGSMSEYFAA
LASSPSLRSSMKPPNFRRVPGLIPNVDITTRSSNLETTDIMDSFVKAQLILYGQDSLHYN
NLDNRVVITLATLSFFCHRPTILAILGFANAINAVENIHDPAGDVSKSPKAGSSTLKLDS
VDEPYSNIVQEPVAKGFLDKGKTRIIFYLSLNMATAQIFLMNEDGVSLATLSQSNLLADI
KYKSCPWKPENK
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgttagaggatcaggtagcatttctccttcagaagtatctagggaactacgtccggggc
ctcaacaaagaagcactcaaaatcagtgtatggaggggcgatgtggaactaaccaatatg
cagctcaagccagaggcactcaacgccttaaaattaccggtgaaagtaaaagctggattt
cttggctctgtgaggcttaaggtaccatggagcaagctaggtcaagagcctgttttggtt
tatcttgaccgcatttttcttttagcagaaccgtcaacccaaattgagggatgctctgaa
tatgctatacaagaagctaagaaaactagattacgggatctggaaatgaagctattggag
cagcagcagcagttgaagtcagaaatgaatacatcatggctgggttcggtaatcagtact
ataattggaaatctgaagctctccataaccaatattcatgttagatatgaagacctggaa
agcaatcctggccacccattcgcagctggcttgacgctatctaggctttcagcagtgacg
gtcgatgaatcagggaaggaaacttttgctactggtggggctctggagcacattcagaag
tctgtgcaacttgatcgcctagctttttattttgactctgatatttctccttggcatatt
gaaaaatcgtgggaagatttacttccttcagaatggagtcagatatttgagctaggagtt
ggcaaagctcaatcatttagtgatgatccaagagagcatgattacattttacaaccagtg
acgggaaatgcgaagtacacaaagctgagaatagatgaatcaaaaacttccggacaagca
ttacagcaggcagtcattaatctagatgatgttacattatgcttatccaaggatggattc
agagacattctgaagcttgctgataactttgcagcttttaatcagcggttaaaatatgct
cattatcgtccacaagttcctgtaaaatctgaccctagagcatggtggacttatgcttac
aaagtggtaactgatgaaatgaagaaggcgagtgggaaactctcttgggaggacgttttg
cgatatgcaagtatccgcaagagatatttgtccctatatgcttctctcttaaagtcagat
ttaacccgcttggtagtggatgacaatgaagagattgacaaattagatcgtgagcttgac
attgatgtcattctacagtggaggatgctggcacacaagtttgtggagcagtctgtagaa
tctgatgtttatcagaataaaaagaaagtgaagcaatcttggtggtcgtttggatggagt
gcttctggaaaggatgatagtggctcaaaaggtttcactgatgaagactgggagaggctg
aataagataatcgggtacaaggatggctctgatgaaaatttggtgactagtcaggagacg
gacttgcctcaattgtttatggagattcacatgaaacacaatgcatcaaagctcattgct
gatggtcaggaatgccttgctgacttatcgtgtgagggactggcctgctcactgaaaact
tattcagagacaaaggttttcgatttcaagttggaatcttacaggctcttatctccaaat
ggtctccttgctgagagtgcatatactgctgattctttcgttggtgtatttacctacaag
ccttttgatgccgaagtagattggagttttgttgctaaagcttctccctgttacatgaca
tatctgaaggattccattgatcaaattatctctttcttcaagagcaatactgctgttact
cagaccttagctttggagaccgctgctgcagttcagatgacaattgatggtgtcagacgc
actgcacagcagcaagtcactcaggcattgagggacagatccaggtttcttattgatttg
gatatttcggctcctaagattactattcccaccgatttttaccctgacgaccatcatgca
acaaaacttcttcttgatttgggaaatctgatgctgtgcacacaggattattggaatggt
gattcctctgaagagaacgccatgtatttgcagttcagtttgattttaagtgacatgtct
gctttcttggttgatggtgactataactggaaagaaacactaagtgatatctcctctagt
caagcacaaatttgtaatttttatcctgttcttgataaatgtggaatcgccttaaagctt
cagcagattcattcagaaagtccattttttccatcaatgagacttgctgcacggttgcca
tcgttgggatttcatgtctctccagctcggtaccatagacttatacatgtagcaaaggtc
ttccaggatgaaggttctagccctgatgctcctcggccttggagtcaagctgattttgag
ggatggttgtctattcttacttggaagggagtggggaatagggaagccgtatggcagcga
agatacttatgccttgttggcccatttctttacgtattggaaaatccagagtcaccatct
tacaagcaatatatcagtttgcgcagtaaacaagtgcatcaggttcccaaagagttcact
ggtgattcacaaaatatgattgcagtgtatgatgctgcccaatcaaatcttaaggtggaa
gatgctagcgcattggtattactttgtgattctgatgaatcaagaaaaacatggcaaaat
cgtcttcaaggggcaatatatcgtgcatcgggttctgcttccatcactggctttactgag
atgtcatctaccactgatgttacaaccccaaaatcctctgatagcaagatatttccagat
gtttggaatatggagaaaattttttttactggtgtccttgatgaactaagagtttgtttt
agctctaattatgagagcaatttgaattttaaaaaagtgctgctaggcaatgagagccaa
ttgtttgagttccgtgcattgggtggtcaggttgagctttccgttagggaaaaagtaatt
tatatgggcaccctattgaaatcacttgagatattagataaatatcaacttgctggagta
gctttgcccagatatcttgcaagatctttcataaagaatacaaaccaagctatgcgggac
aatgatcaattaaatcaagctgacaatgaagataagtttttcgaagcatcagatgaactt
gatgatgttggtttgtatcctactcaacgaagtggtagtatgtcagagtattttgctgct
ctagcctcctctccatctttaagatcttccatgaagcctcctaactttagacgagttcct
ggtttaatacccaatgttgatattacaactagaagttcaaatttggaaactactgatatt
atggatagttttgtgaaagcacagctgatcttgtatggccaggattctcttcattacaat
aacttggataatagagttgtaattactctggctacattgtcattcttctgtcatcgacca
actattcttgcaatattgggatttgctaatgctattaatgctgtggaaaacatccatgat
cctgctggggatgttagcaaatctcccaaggccggcagtagcactttgaaattagattca
gttgatgaaccctatagcaacatcgtccaggagccagttgcgaaagggtttctagacaaa
ggaaaaaccagaattatattttacctgtcgcttaatatggccacagctcagatatttttg
atgaatgaggatggggtctctcttgctacattgtcacaaagtaatttgctcgctgatatc
aagtataaaagctgcccttggaaacctgaaaataagtga
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