Dendrobium catenatum: 110104741
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Entry
110104741 CDS
T05027
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
dct
Dendrobium catenatum
Pathway
dct03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110104741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110104741
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110104741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Utp13
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
UTP15_C
SGL
Beta-prop_IFT140_2nd
Beta-prop_NOL10_N
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WDR93
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
110104741
NCBI-ProteinID:
XP_020689638
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MAAPPTVTLKKNYRCSRFLQKFYSGGAYAVSSDGSFIACACNDEIKIVETSNSVVREILE
GDGEEVTALTFSPNDRFLFSASHSRLIRVWDLSSFKCIRSWKGHDGPVTSMSCHSSGGLL
ATAGADTTVRVWDVDGGFCTHLFRGHTGVVTCIAFHPDPKCLLLFSGSDDESVLVWSLES
KKRIAALKESDTSRVSSLAISEDGRSLLIAERGGVVTIWDLQKYNRQQTVTIKEKDNPFE
TVNTVCIIPDGSLILTCLSQCKSQNKENGVAIQPIYFLTVGEDGLVRIWSFFFKSSAVCI
YKQKSSGAMPGCVKSGVGFLSAFVLPQNQGLLCVTSDEQFLFYRPEKSSDGAFQLSLYRR
LIGYNEQILDMAFLGDEEQYLGVATNSEQLQVYDLESMSCSYVLSGHAAVVLCLDSCKSN
SGRTLIVTGSRDHHVRLWDAQRRSCVGIGKGHMGDVGAVVFSNKWKNFFVSGSSDRTIKV
WSFDGVSEDVDQDVTLKSKAVVAAHDKDINCLAISPIDSLVCSGSEDRTACIWRLPELIS
VMVLKGHKRGIFSVEFSPVDQCVLTSSGDRTIKIWAISDGSCLKTFEGHTAGVSRAFFLS
RGTQFVSCGFDGLVKLWTIKSNECIATYDQHDERIWALAIGRKSEMFATGGEDAVINLWF
DSTAADKEENFRMEEEAILRGQELENAISDADYAKAIQLAFELRRPHKLFELLSQLCRRD
AVDPLEKSLRNIGKDELRVLLEYVREWNTKPKLCHVANFVLFRVFKLFPPTEVIEIKGIS
ELLEGLIPYSQRHFSRIDRLVRSSYLLDYVLNEMSVIEPENVSLQSSETSVLSSEFVALE
KHIPSELCKQANDHHEVINEEFKAISPDVEERVFPKKRKTNKSKKGFSAKKLKSASTIAS
IS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccaccaaccgtaaccctgaagaagaattaccggtgctcacggttcctgcag
aaattctacagtggaggcgcctacgccgtctcttccgacggctccttcattgcctgtgcc
tgtaacgatgagatcaagatcgtcgaaacatcgaattctgttgtgcgggagattctcgag
ggcgatggagaggaagtcactgctctaacctttagccctaacgatcggttcctcttctct
gcgagtcacagtcgattgatccgcgtgtgggacctctcttctttcaaatgcatacggtca
tggaagggtcatgatggcccagtgacaagtatgtcttgtcattcatctggaggcttgctt
gcgactgctggtgcagatacaaccgtgcgtgtttgggatgttgatggtggattttgcaca
cacctctttagaggtcacacaggggttgtgacatgcatcgctttccatcctgatccaaaa
tgtttattattgttttcaggaagtgatgatgagagtgtacttgtttggagtcttgaaagc
aagaagcggattgcagcactaaaagagagtgatacttcacgtgtctcttccctggcgatt
tctgaggatggaagaagtttgcttattgctgaaagaggaggggttgttactatatgggac
ctgcaaaagtataaccggcaacaaacagtaactattaaggagaaggataacccgttcgag
acagttaacactgtttgcattattccggatggaagtttgatattaacttgtttgagccaa
tgcaagtctcaaaacaaggaaaatggggttgctatccagccaatctattttttaactgtt
ggtgaagatgggcttgtacgtatatggtcctttttctttaagagtagtgcagtttgcatt
tacaagcagaaatcttctggtgcaatgcctgggtgtgttaaatctggtgtggggttcttg
tcagcttttgtactacctcagaatcaagggctgctctgtgtgacctctgatgagcagttc
cttttttaccgcccagaaaaatcttctgatggagcattccaattaagtctgtatagaagg
ctgattggctataatgaacagatacttgatatggcattcttaggtgacgaggaacaatat
ctcggtgtggctacaaattcagaacagttgcaagtttatgatctggaatccatgtcatgc
tcttatgtcttaagtgggcatgctgcggttgtattatgtttggattcatgcaaatcaaat
tctggaaggacgcttatagtaactggaagcagggaccaccatgttagactctgggatgct
caaagaagaagctgcgtcggaattggcaagggccatatgggagatgttggtgctgttgtc
ttttcaaataagtggaagaacttttttgttagcggtagtagtgatcgaactattaaagta
tggagctttgatggtgtttctgaagatgtggatcaagatgttactcttaaatcaaaagct
gttgttgctgctcatgacaaggacataaactgtcttgctatctcaccaattgatagtctt
gtttgtagtggctctgaggatcgtactgcttgtatatggaggcttcccgagcttatatct
gtgatggtcttgaaaggacataagagaggaatattttctgttgagttttctcctgttgat
caatgcgttctgacatcttcaggcgataggaccattaaaatttgggcgatttctgatggt
tcatgtttgaaaacatttgaaggtcatactgcaggcgtatctcgggcctttttcctttca
cgtggaacacaatttgtttcttgtggttttgatggcttggtgaagttgtggacaattaag
tctaatgaatgcattgctacttatgatcaacatgatgaaaggatttgggcattggctatt
ggcaggaagtctgaaatgtttgctactggcggtgaagatgcagttattaatctatggttt
gacagtactgctgcagacaaggaggagaattttcgaatggaagaggaagcaattcttaga
ggccaagaactcgaaaatgctatctcagatgctgattatgccaaggcaattcaacttgca
tttgaactgagaagaccacataaactttttgaattgctctctcaactatgcaggagagat
gctgtagatcccctcgagaaatctctccgcaatattgggaaggatgaactccgtgttctt
cttgagtatgttcgggagtggaatacaaaacctaaactgtgccatgttgccaacttcgtg
ctttttcgagtatttaagttgtttccgcctacggaagttatagagataaaaggcatcagt
gaacttttagaaggtcttattccttactcgcagaggcacttcagcagaattgataggctt
gtgaggagcagttacttgttggattacgttttaaatgaaatgtccgtcatagaacctgag
aatgtttcactgcagtccagtgaaacatccgtgttgtcctcagagtttgttgcgctggag
aagcatattccttctgaactttgtaagcaagcaaatgatcaccatgaagttatcaatgaa
gaattcaaggcaatttctccagatgtggaagaaagggtttttccaaagaaaaggaaaaca
aacaaatcaaagaagggtttttcagcaaagaaactaaagtctgcatctactattgcctct
atttcatga
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