Dendrobium catenatum: 110104838
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Entry
110104838 CDS
T05027
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110104838
Membrane trafficking [BR:
dct04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
110104838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
Foie-gras_1
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
110104838
NCBI-ProteinID:
XP_028548578
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MANYLAQFQTIKSSCDRLIIAVEDVSDLWPSVKEGFEERLPLKKALLSNKTRNTVNVENL
SAEFILTTDSRLRSRFSQELSVFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPNNDQATKMAKKIYARLQVDFNSKKRERCCKLDLQGPDANFWEDLDSKI
VESIRNSLDRRIQFYEEEIRKLTEQRFMPVWSFCNFFILKESLAFMFEMAHLFEDALREY
DELELCYLETGKFELDMKTTYMDIVEIFRGILKDSSTFIRFSVLEDGLVVYFDKIKVMNG
CVRKNLEFPQLLFKLFRAVEVASRGYSFIINFSKTLALYENFLPFCFREVWVITACLAMI
KSTASHFDGSHATADGKEFFRLQGDLYSLSRVKAVRAEVMQNLSFERWYFDVERVLEESE
VGIGGVLSLEGHLMVNQTCPVLIENGLHRKQASLIVVDHYSRHPLATTTTVVRCYPAPVI
DPTAASRRHQLTPAAAGHHHCRRPPPPTIITAGRCSLHQFSVAVVAAAATAATYATTYCL
QLLFKLFRAVEVASRGYSFIINFSKTLALYENFLPFCFREVWVITACLAIINSTASHFDG
SHATADGKEFFRLQGDLYSLSRVKFMRLAYLIGYGVEMERSPVNSASLSMLPWPKPAVWP
LVPPEASADVLEKEKMVHQSSSRVKHFNIERKPLPLEPSLLLREANRRRASLSVGNASEL
FDGRWGDGSGLDGHLQFSPAGKVHANLMSRTLSGPANSENSSLSFDRPMRLWEIHVAAEH
ALKRTISDPDLLKSISSLPDFEKKYMELTKGAADNYHQSWWKRHGVVLDGEIGALCLKHG
NYDLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLSSCVRLLSLDNGLF
STKERQVFQSEVVRLAHGEMKHPVPLDVSSLITFSGNPGPPLELCDGDPGTLAVTVWSGF
PDDIALESLSLTLMSTFSTDEGVKDIKSSDAPVLKRGHNLIMLELPPQKPGSYVLGVLTG
QIGQLRFRSHSFSKGGPPDSDDFMSYEKPTRPVLKVHKPRPLVDITAAASSTLLINEVQW
VGLVVSPMNYSLKGAILHIDTGPGLIIEESHMIEMEHYRKATDHMVNCSGLNIVKEDACL
SEVCEKLLLENGQLAFPDWAGDLATVLWLPVRAIDNMLARGTSSVNPSRHSVVDGMRMIA
LKLQFGVFHNQIFERTIAVHFSEPFHVSTHVVDKCNDGTLLLQVLIYSQVKASMKLCDAW
LDLQPGFVHVGKSDGRPTSSFFPFVVSPSSRAAILFVICVGNISRTGMLLFPSK
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggccaactacttggctcagttccagaccattaagagctcctgcgatcgcttaatcatc
gccgtggaagatgtaagtgacctgtggccaagtgttaaggagggatttgaagaacgcttg
cctctaaagaaggctcttcttagcaacaaaactcgaaacactgtcaatgttgagaattta
tctgcagagtttatattaacaactgattcaaggctacgcagtcgcttttcacaagaactg
tctgtcttctggttccgggaaccatatgcaactgttgttcttgttacttgtgaggatctt
gatgagttcaagacaattctaaagcctcgactaaaattaattgttcaaaatgatgagcga
gagtggtttattgtatttgtgtcaaaagctcaccccaacaatgatcaagcaactaagatg
gctaaaaagatatatgctagacttcaggttgattttaattcaaaaaagagggagaggtgt
tgtaaattggacttgcaaggacctgatgcaaacttttgggaagatttggattctaaaata
gttgaatctattaggaattcattagatcgacgcattcaattttatgaggaggaaattcgc
aagctcactgaacagcgttttatgccagtctggagcttctgtaacttctttattttaaag
gaaagcctagcgttcatgtttgagatggctcatctttttgaagatgccttgcgtgaatat
gatgaactagaactttgctatttagaaacagggaaatttgaacttgacatgaaaactaca
tatatggacattgtggaaattttcagaggtattttgaaggatagttccacttttatcaga
tttagtgtattagaagatggattagttgtttactttgataagattaaagtgatgaatggt
tgtgttaggaaaaacttggaattcccccaactattattcaaattatttcgtgctgttgag
gttgcttcaaggggctattcatttataattaacttctcaaagactctagccttgtatgaa
aatttcctaccattttgcttccgagaagtatgggtgataactgcttgtttagccatgatc
aaatcaactgcttctcattttgatggctcacatgcaacagcagatgggaaggagtttttt
cgtcttcagggtgacctttactcgctcagccgggtgaaggcagtaagagctgaagtaatg
cagaatttatcctttgaaagatggtattttgatgtagaacgggtattggaggagtctgaa
gtaggtattggaggagtattgagcctagaagggcatctcatggtaaaccaaacttgccca
gttttgatcgagaatggtttacaccgcaaacaagctagcttgatcgtagtcgaccattat
tcccgccacccgctggccaccaccaccaccgtcgtccgttgctacccagcgccggtcatc
gaccccaccgccgctagccgtcgtcaccaattgacacctgctgctgccggccaccaccac
tgccgtagaccaccaccaccaaccatcatcactgccggccgctgcagcctccatcagttc
tcggttgccgtcgtcgccgccgctgccaccgccgccacctacgccaccacctactgtttg
cagctattattcaaattatttcgtgctgttgaggttgcttcaaggggctattcatttata
attaacttctcaaagactctagccttgtatgaaaatttcctaccattttgcttccgagaa
gtatgggtgataactgcttgtttagccatcatcaattcaactgcttctcattttgatggc
tcacatgcaacagcagatgggaaggagttttttcgtcttcagggtgacctttactcgctc
agccgggtgaagtttatgaggcttgcatatttgattggttatggagtggaaatggaaagg
agtccagtaaacagtgcatctttaagcatgctaccctggcccaagccagcagtgtggcca
cttgtcccacctgaggcctcagctgatgtacttgaaaaggagaagatggttcatcaatca
agttccagagtgaagcacttcaacattgagagaaaaccattacctctggaaccttcttta
ctgctaagggaggctaatagaaggagagcttctctttctgtgggtaatgcgtccgagtta
tttgatggtcgctggggtgatggttcaggtttggatggacatttacaattctccccagcc
ggtaaagttcatgcaaaccttatgtcacgaaccctatctggtcctgcaaactctgagaac
tcatctttatcatttgaccggcctatgagactttgggaaatccatgttgcagctgaacat
gcattgaagcgtacaatttctgatcccgatttattgaagtcaatatcatcattacctgat
tttgagaagaagtacatggagctaacgaaaggtgctgctgacaattaccaccaatcatgg
tggaaaaggcatggagtagtccttgatggagagattggtgcgctttgcttgaagcatgga
aattatgatcttgctgcaaagtcatatgaaaaggtctgtgctctttatgctggtgaagga
tggcaagacttgttggctgaggttcttcctaatttagcagaatgccagaaaattcttaat
gatcaggcaggctacctctcatcatgtgttaggctattatcactggataatggtttattt
tcaactaaggagaggcaagtttttcagtcagaggttgttcggctggctcatggtgagatg
aagcatccagtgcctctagatgtttcatcgttaatcacattttctggaaatccaggtcct
ccacttgagctatgtgatggtgaccctggtacattggcagtaacagtctggagtgggttt
cctgatgatattgctcttgagtctcttagcttgacattaatgtctacatttagtactgat
gaaggggtgaaggatataaaaagttcagatgcacctgtactaaaacgtggccataatctt
attatgcttgaattaccaccccaaaagccaggatcctatgtattaggtgttcttactggg
cagattggccaattgagattcagatcacatagcttttctaaaggtggcccccctgatagt
gatgatttcatgagctatgaaaagccgaccaggcctgtattgaaggtgcacaagccaagg
cctttagttgatattactgcggccgcatcatctactttgttaataaatgaagttcaatgg
gttggactagttgtaagtccaatgaactactcccttaaaggtgctatcttacatatagat
actggtcctggattgattattgaagaatctcatatgattgagatggagcattacagaaaa
gctacagatcatatggttaattgcagtggcttaaatattgtcaaagaagacgcttgttta
agtgaagtatgtgagaagctgctgcttgaaaatggccaactagcttttccagactgggct
ggtgatttggctactgtcttgtggctccctgtccgtgccattgacaacatgctagctcgg
ggaacatcctctgtaaatccttcccggcacagtgttgtagatggaatgcggatgattgct
ttgaagttacaattcggagtttttcacaaccaaatatttgaaaggacgattgctgtgcat
ttttctgagccattccatgttagcacacatgttgtggacaaatgcaacgatggtacttta
cttttgcaggtacttatatattcccaagtgaaggcttctatgaaactatgtgatgcatgg
ttagaccttcaaccagggtttgttcatgtggggaaaagtgatggaagaccaacttcaagt
ttcttcccttttgtagtctctccatcctctagagcggctatcttatttgtcatatgcgtt
ggaaatatttctagaacaggtatgcttctttttccttcaaagtaa
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