Dendrobium catenatum: 110104920
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Entry
110104920 CDS
T05027
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
dct
Dendrobium catenatum
Pathway
dct03420
Nucleotide excision repair
dct04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110104920
09124 Replication and repair
03420 Nucleotide excision repair
110104920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110104920
03400 DNA repair and recombination proteins [BR:
dct03400
]
110104920
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
110104920
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110104920
TCR (transcription coupled repair) factors
Cul4-CSA complex
110104920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Beta_propel
Motif
Other DBs
NCBI-GeneID:
110104920
NCBI-ProteinID:
XP_020689877
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSFWNYVVTAHKPTAVSHSCVGNFTSPQELNLIIAKCTRIEIHLLSAHGLQPMLDVPIYG
RIATLELFRPHGESQDLLFIATERYKFCVLQWDGEASELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIAVL
YQDNKDARHLKTYEVALKDKDFIEGPWSQNNLDNGAGLLIPVPLPLGGVIIIGEETIVYC
NGSSFKAIPIRPSITRAYGRIDPDGSRFLLGDNSGLLYLLVISHERERITGLKIEHLGET
SVASSISYLDNAVVYVGSKYGDSQLIKLNLQPDEKGSYVEVLEKYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGLWSLRSSTTDPNDTFLVVS
FISETRILAMNMEDELEETEIEGFYAQAQTLFCQNALHDQLVQVTASSVRLVSCTSRELQ
DQWIAPTGFSVNVATANATQVLLAIGGGHLVYLEIGDGKLTEVKHIQLEYEISCLDINPI
GEKANSSALAVVGMWTDISVRIFSLPSLDLITKESLGGEIIPRSVLICSFEGISYLLCAL
GDGHLFNFLLNLATGELSDRKKVSLGTQPITLRTFSSKDTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELSIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKNCLINNDETEVHFVRLLDDQTFEFISTYQLDTFEYGCSIISCSFSDD
NNVYYSVGTAYVLPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKLMLREDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLLYKHEEG
AIEERARDYNANWMTAVEILDDDVYLGAENNFNLFTVRRNSDGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEAGNIPTVIFGTVNGVIGIVASLPHDHYVFLEKLQSNLVKV
IKGVGGLSHEQWRSFNNEKKTVDARNFLDGDLIESFLDLSRSRMEEISKTIGVSVEELCK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctggaactacgtggtgacggcacacaagcccacggccgtctcccactcctgc
gtcggcaacttcaccagtccccaggaactcaacctcataatcgctaaatgcactcgcatt
gagatccatttgctttctgctcatggtctgcagcctatgctagatgttcccatatacgga
agaattgcaactctggaactttttcgacctcatggtgaatctcaggatctcctctttatt
gctacagaaagatacaaattttgtgtgcttcaatgggatggagaagcatcagagctaatt
acaagagcaatgggggatgtttctgatcgtattggtcgaccaacagacaatgggcagatt
ggcataattgatcctgattgtagattgattggactccatttatatgatggtttgttcaag
gttataccgttcgacaacaaagggcaattgaaggaagcattcaatatcagactcgaagaa
cttcaagtcttggatatcaagtttctttatgggtgttcaaaacctacgattgcagtcctc
taccaggataacaaagatgcccgtcaccttaagacatatgaggttgcactcaaggataag
gattttatcgagggtccatggtcgcagaacaatcttgataatggggctggtctgctaata
cctgttccattgcctttaggtggtgttattatcattggggaggagactatcgtgtattgc
aatggttcttcatttaaggctatccctatcagaccgtcaattaccagagcatatggcagg
attgaccctgatggttctcgatttttgcttggcgataattctggacttttatatttactt
gtcatctcccatgaaagagagaggatcactgggctaaaaattgagcacctaggagagacc
tcagttgcatcatcaatttcatatcttgataatgcagttgtatatgttggttctaagtat
ggagattcacagcttatcaaacttaatctgcaaccagatgaaaaaggctcatatgttgaa
gttcttgaaaaatatgtcaatcttggcccaattgttgacttctgtgttgtggaccttgag
aggcaagggcaaggtcaggtggtcacttgctcaggagcatataaagatggttcacttcgt
attgttcgaaatggtataggaataaatgaacaggcgtcagtagaacttcaaggtatcaaa
gggctatggtctttaagatcttctactactgatccaaatgacactttcttggtggtaagc
tttatcagtgagacacgtattttggctatgaatatggaggatgagttagaagaaactgag
atagagggcttctatgcgcaagcacagactttattttgccaaaatgccttgcatgaccag
cttgttcaggttactgcaagttctgttcgtcttgtgagctgtacatcccgtgagctgcaa
gatcaatggatcgctcctactggtttttcagttaatgttgctactgcaaatgctactcag
gttttgttggctattggaggtggccatcttgtttatcttgaaattggggacggaaagctg
actgaagtaaaacatatacaattggaatatgagatatcatgtctagacataaatccaatt
ggtgaaaaagctaattctagtgctctggcagtagttggtatgtggactgatataagcgtc
agaatattttccctaccgagcctggatcttattacgaaagagagccttggtggagaaatt
atcccacgttctgtcttgatttgttcatttgaaggaatctcatatttgctatgtgccctt
ggcgatgggcatctcttcaactttttattaaatttagctaccggtgagttatctgatagg
aagaaggtttctcttggaacacagccaatcactcttcgaacattttcatcaaaggatacc
acacatgtgtttgctgcctctgataggccaacagttatttacagcagcaacaaaaaattg
ctctatagtaatgtaaatcttaaagaagtcagtcacatgtgtccatttaattcagctgct
tttccagacagtcttgcaattgcaaaagaaggtgaactttctattggaacaattgatgat
attcaaaaacttcacattcgctcgatcccgcttggtgaacatgctcggcgtatctgccat
caggaacagtctcgaacttttgctatatgtagtttaaaaaattgtctgattaacaatgac
gagacagaagttcattttgttcgtttgctggatgatcaaacatttgagttcatatcaact
tatcaattggacactttcgagtatggctgctctataattagttgctccttctcagatgac
aacaatgtttactattctgttggtacagcatacgttttacctgaggaaaatgagcctact
aagggacgtatcctagtttttgtagttgaagatggtaagctacaactaatagctgaaaag
gaaacgaaaggagctgtatactccctcaatgcattcaacgggaaattacttgctgcaatc
aatcagaagattcaattgtacaagctgatgcttcgcgaggatggaacacgggaattgcaa
tctgagtgcggacatcatggtcacatacttgctttatatgtccaaacccgaggtgatttc
attgtggttggagacctgatgaagtctatttctttgcttctatataagcatgaggagggc
gccattgaagaacgagcccgggactacaatgcaaactggatgactgctgttgagatcctt
gatgatgatgtttaccttggtgctgaaaacaacttcaaccttttcacagtgagaagaaat
agtgatggagccactgatgaggagcgtggccgtttggaagttgtcggcgagtaccacctg
ggcgagtttgtgaaccgcttccggcacggctccctcgttatgcgccttccagactccgaa
gctggcaacatccccactgtcatctttggcaccgtcaatggtgtgattgggattgtggcc
tctctccctcatgaccactatgtgttccttgagaagcttcagtccaatcttgtcaaagtt
ataaaaggcgtcggtgggctcagtcatgagcaatggaggtctttcaataatgaaaagaag
acagttgatgcaaggaatttcttagatggtgacttgatagagtcctttctggatctcagt
cgtagcaggatggaagaaatttctaaaacaattggggtatcagttgaggagctttgcaag
agagttgaggagctgacgagattgcattga
DBGET
integrated database retrieval system