Dendrobium catenatum: 110104970
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Entry
110104970 CDS
T05027
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110104970
Membrane trafficking [BR:
dct04131
]
Protein recycling
Others
EARP complex
110104970
Endosome - Golgi transport
Tethering complex
GARP complex
110104970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
COG4_N
Vps54_N
RINT1_TIP1
Baculo_gp41
MSP1a
FUSC
Motif
Other DBs
NCBI-GeneID:
110104970
NCBI-ProteinID:
XP_020689945
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQQIQSEIRRVDDSILAAVRRQSNSGTKAKEDLA
AATNAVQELMHKIHEIKTKAEQSETMVQEICRDIKKLDFAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKIAELREKFKNIKKILKSHVFSD
FSSLGTGKETEETNLLQQLSDACLVVDALEPSVREELVKNFCNKELTSYRQIFEGAELAK
LDKTERRYAWIKRRLRTNEDIWNIFPSAWHVDYLLCIQFCKLTRMQLVDILNSLKEKPDV
GTLLLALQRTLEFEEELADKFGGNTTSRERDFGSDEEADETKNKNQIVSDIRKKYEKKLA
MHNGGGIDPDKNKDSSVPDAGFNFHGIISSCFEPHLAIYVELEEKTLMEHLEKLVQEETW
ETEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFEVFQKILKAYATKLYAKLP
KAGIGIVAAATGMDVQIKMSDRDERMICYIVNTAEYCHKTSGELAENVSKVIESQYADKV
DMSEVQDEYSAVITKALLTLVQGIETKFDAEMVAMTRVPWASLESVGDQSEYVNGINSIL
TSSIPTLGSLLSPTYFQFFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTIL
LDIPTLGKQQSTVAAGYSKFVNREMSKAEALLKVILSPLDSVANTYRALLPEGTPLEFQR
ILELKGLKKADQQNILDDFNKHSPGINHPSIPPSVIVPSQPDSAVVPHTIITSAAATTTA
SIGAAVSVAITSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGAFRKLFNP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtctagtgctttggagtacatcaaccagatgttccctactgaggcatcatta
tctggagtcgaaccacttatgcagcagatacagagtgaaattcgtcgtgtggatgatagt
atattggctgctgttcgtcgacagagtaactctgggacaaaagccaaggaggatcttgct
gcggcaacaaatgctgttcaggaattgatgcacaagattcatgaaattaagacaaaagcg
gaacaaagtgaaacaatggtccaagaaatctgtcgtgatatcaagaaacttgacttcgcg
aagagacatataacaacaacgattactgctcttcatcgtcttacaatgcttgtctcagcc
gttgagcaacttcaagtaatggcctcaaaacgtcagtataaggaggccgctgcacagctg
gaggcagtaaatcaactgtgtagtcacttcgaagcttatagagatgtaccaaaaatagca
gagcttcgagagaagttcaagaacatcaaaaagatacttaaatcacatgtattttcagat
ttttcgagtttgggaactggaaaagagacggaagaaacaaatttactgcagcagctttca
gatgcttgcttggttgttgatgcattggagccatccgttagggaagagttggtaaaaaat
ttttgcaacaaggaactaacatcttacaggcagatttttgaaggcgcagaactagcgaag
cttgataagactgaaaggagatatgcttggataaagaggagattacgaacaaatgaggat
atctggaatatttttccatccgcatggcatgttgactatctgttatgcatccaattttgc
aagctgacaaggatgcaacttgtggatattctgaatagcctcaaagaaaagccagatgtt
ggaacactactattggcactacagaggacccttgaatttgaggaagagttagctgacaaa
tttggaggaaatacaacctctcgagaaagagattttggaagtgatgaagaagcagatgag
actaagaataaaaatcaaattgtctcggatatcaggaagaaatatgaaaaaaagctcgcc
atgcataatggaggaggaatagatccagacaagaataaggactcttccgtgcctgatgct
gggttcaactttcacggtattatttcatcctgttttgagccgcatttagccatttatgtg
gaacttgaggagaagacccttatggaacatttggagaaacttgttcaggaagaaacctgg
gaaactgaagagggtagtcagacaaatattctatcaagtagcatgcaggtattcttaata
atacggagaagcttaaagcggtgcagtgcattgaccaagaatcaaacgctgtttaacttg
tttgaggtatttcaaaaaattcttaaagcatatgcaacaaaattatatgctaaactaccc
aaagctggtattggtattgttgcagcggctactggcatggatgtgcagataaagatgtct
gatagagatgagagaatgatatgctatatagttaatacagcggagtactgccacaagacg
tccggtgaactggcagaaaatgtttcaaaggtcattgaatctcagtatgcagacaaggtg
gacatgtctgaagttcaggatgagtattccgcagttatcacaaaggctttgttgacacta
gtacaaggtattgaaactaagttcgatgctgaaatggttgcaatgacacgtgttccatgg
gctagtctcgaaagcgttggtgaccaatccgagtatgtcaatggcataaactccattctt
actagcagtattcctacacttggaagccttctttctcccacttatttccaatttttcttg
gataagttagcagcttctcttggccctcgattctacttgaacatttacaagtgcaagcac
atatcagaaactggcgcacagcagatgttgttggacactcaggctgtgaaaacaatccta
ttagatatcccaaccttagggaagcagcagtccacggttgctgctggttattctaagttt
gtaaatcgtgaaatgagcaaagcagaagcactcttgaaggttatattgtctcctctcgac
tctgttgctaatacataccgagcactgcttccagagggcacgccgttggagtttcaaaga
atacttgaactcaagggtttgaagaaagctgatcagcaaaacattttggatgattttaac
aagcatagtccaggcatcaatcacccttctattcctccatcagttattgtaccatctcaa
ccagattccgcagttgttccacataccataataacttctgctgctgctaccaccacagcc
tccataggcgcggctgtctcagtagctattacatctcgagaagacgtgctgactcgtgct
gctgctcttggcagaggagctgccaccacaggcttcaagaggttccttgccttaactgag
gctgccaaagaccgcaaggatggggcttttcggaagctcttcaatccttaa
DBGET
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