Dendrobium catenatum: 110105065
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Entry
110105065 CDS
T05027
Name
(RefSeq) vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
dct
Dendrobium catenatum
Pathway
dct04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110105065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110105065
Membrane trafficking [BR:
dct04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110105065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
110105065
NCBI-ProteinID:
XP_020690088
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MLPDAGSEDEEKWLAEGIAGLQHNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHK
YYELYMRAFDELRKLEMFFKEETKRGCSVIDLYELVQHAGNILPRLYLLCTVGSVCIKSK
ETPAKEILKDLVEMCRGVQHPVRGLFLRSYLSQISRDKLPDIGSEYEGDGDSFIDAVEFV
LQNFTEMNKLWVRMQHQGPVREKEKRDKERSELRDLVGKNLHVLSQIDGVDLDIYKDTVL
PRVLEQVVNCKDELAQHYLMDCIIQVFPDEYHLQTLETLLSACPQLQPTVDIMTVLSQLM
DRLSNYATSSTEILPEFLQVEAFAKLSNAIGKVIDSQPEMPIVGAITLYVSLLKFTLRVH
PDRLDYVDQVLGACVKKLSGKPKIEDNKATKQIVALLSAPVEKYNDIDTALKLSNYPRIM
DHLDNATKKIMAVVIIQSIMKNNTYISTADKVEALFELIKGLIKDMDEIQDEELDEEDFK
EEQNSVARLIHMLYNDDPEEMLEIIQTVRKHILLGGPKRLAFTVPPLIFSALKVRLLWYM
YLNCLVFDLVGLCGILMSFASVANISIFLECLFLLLHMFWLLVWAMMSDANILPGYPLDG
LAGWPCDNQGFSAFYMVLLILLDEAFLLAGFLLELSLSIDLLCAGYLIWSFRSIDPFLLL
YSSYACRVLLCLKRAIRIANAAQQMANVTRGSSGPVTLFVEILNKYLYFFEKGNPQITSS
AIQGLIELIMNEMQSDNSPSDPSADSFFSSTMRYIQFQKQKGGAIGEKYEPIKV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcttccggacgcaggcagcgaagatgaggagaaatggctggccgaggggatcgccggc
ctccagcacaacgccttctacatgcaccgcgctctcgactccaacaatctgcgtgacgcc
ctcaagtactcggctcaaatgctctccgagctgcgcacgtctaggctttccccccataag
tactacgagctctacatgagggcgttcgatgaactgaggaagctggagatgttctttaag
gaggagaccaagaggggatgctctgtgattgatctgtacgagcttgtgcagcatgctggg
aacatccttcctaggctgtatctcctatgcacagtgggatctgtgtgcataaaatcaaaa
gaaactccagcaaaagagatccttaaagacctagtagaaatgtgtcgaggcgtacaacat
ccggttagggggctctttctcaggagttatctctctcagatcagcagggataagttgcct
gatattggctcagagtatgaaggggatggtgatagttttattgatgctgttgagttcgtg
cttcagaatttcacagaaatgaataaattatgggttcggatgcaacatcagggacctgtt
cgagaaaaggagaagcgggacaaagagaggagcgagcttcgagatcttgttggcaaaaat
cttcatgttctcagccaaatagatggagttgatcttgatatatacaaggatactgtgctt
cctagagtattagaacaagtggtcaattgcaaagatgaattggcccaacattatctgatg
gattgtattatccaagtctttccggatgaataccacttgcagactctggaaacattatta
agtgcatgtccgcaactccagccgactgtggacatcatgacagtcctatctcagcttatg
gacagattatcaaattatgctacctctagcacggaaattttaccagaatttcttcaagta
gaggcctttgctaagttgagcaatgccattggaaaggtcattgattcccagccagagatg
ccaattgttggtgccataactttatatgtctcacttcttaagtttactcttcgtgtgcat
ccagatcgtcttgattatgtggatcaagtactgggagcgtgtgttaagaaactctcaggc
aaaccaaagattgaggataacaaggcaactaagcaaatcgttgcccttctaagtgctcca
gtggaaaagtacaacgacatagatactgcattaaagctctctaactatcctagaatcatg
gaccaccttgataatgctacaaagaaaatcatggcggttgttattattcaaagcatcatg
aagaacaatacctacatatctactgcagacaaggttgaggcattatttgagttaataaaa
gggcttatcaaggatatggatgagattcaagatgaggagcttgacgaagaggatttcaag
gaggagcaaaattcagttgctcgcctcattcacatgctgtacaatgatgatccagaggag
atgctggagatcattcaaaccgttcggaagcatattcttcttggaggacctaaacgcctt
gctttcaccgtaccaccacttatattttctgctcttaaggttcgtttgttatggtacatg
tatctaaattgtttggtttttgatctggtgggcttatgcggcattctgatgtcttttgct
tctgttgctaacatctcgatttttctggagtgtctttttctgctgttgcacatgttttgg
ctgctcgtttgggctatgatgagtgatgccaacatcctacctggttaccctttggatggc
ctcgctggatggccctgcgacaaccaggggttctccgccttctatatggtattgctgatc
cttctcgatgaggcatttttattggctggttttttactggagctttctctttctattgat
ctcttgtgtgctggatatcttatttggtctttccgtagcatagatccttttctgctctta
tactcttcttatgcttgcagagttctcctatgcttaaagcgtgccattaggattgcaaat
gctgcccagcaaatggccaatgttacaaggggcagcagtggacccgtcacattgtttgtt
gaaatactcaacaagtatctgtatttcttcgagaaaggaaatcctcagatcaccagctcg
gcaattcagggtctgattgaattgattatgaacgagatgcaaagtgataactcaccatca
gatccatcagctgattctttcttttccagcacaatgcgttacattcagttccagaagcag
aaaggtggtgccattggcgaaaagtacgagccaatcaaggtttag
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