Dendrobium catenatum: 110105181
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Entry
110105181 CDS
T05027
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dct
Dendrobium catenatum
Pathway
dct03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110105181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110105181
03036 Chromosome and associated proteins [BR:
dct03036
]
110105181
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110105181
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110105181
PBAF complex
110105181
GBAF(ncBAF) complex
110105181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
110105181
NCBI-ProteinID:
XP_028553065
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MMEGRRGREAPAAAENLEVKPPVPFETPGEAPRRRTGGQKRKAASSIFAVSSSSSTSKRL
VKERNALNILPSGHNGPITRARQFPGKIAAGSPQTPQEGVLIAETLVGELAKEMMFSEDP
VKSVEDSAEPSDVTTMELEFEAVRSRGVGVHVVPTSAGWFSWEKIHELEKHALPSFFNGQ
SESRTPEIYVDIRNSIMKKFHVDPQTPMEVKDLSDISVGELGARQEVMEFLDHWGLINFH
PFPHSGTDKRVIEAGAEKTTSLLDQLYQFENVESLPCYVPKKQESPPSSMLPQLLPESAL
LDDMMRPVDPSVEYHCNSCSGDCSRRRYHCQKQADFDLCAECYNNGKFGSGMTPADFILM
ESAEGPGVSSRSWTDQETLLLLEALELFGENWNEIAEHVATKTKAQCILHFLQMPIEDPF
LDVQENSSDNMLEKIEPCSANKESSVVKVPEAIEVENGMSSEHPVSSPADVSDMKYAEVD
LCGETYSNFAVNSLKSAFQAVGFTNDDGRMFSFAEAGNPAMVLVAFLAGLVDQDAVSTSC
RTSLKSMLEESPGTQLVSRHCFILEEPLNDARSPVPESAVAANGDLEALKEEEQLPSSNG
SAELKNETINNQPNANSGQSEMKQPASPNESPQKSTVKELSDSFLPVDVTSGNSEPDNKS
LPEELTSQSDRKDASSFDEAMVNKTSNSKELGDFPVHDGDAPSMLKFVDDQKLSEEGKPE
SVEQSCNSELIDQVQQISELTKVEDTTPTSIVLKEEPEQKDSADSTLDVNVVAGGDDKKI
SSPKIDINISTTSDSSHSANNIKRAAVTVLSAAAVKAKLHADQEEDQIRQLVSCMIEKQL
RKMEIKLAFFPEMENLIIRAKEQTERARQKLINERTQIIAARLFQSQSSSRPYATPSAYA
KLAMGYGNMSIRPPNMAYQRPPPPRRP
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggggaggcgtggacgggaggccccggcggctgcagaaaacctagaagtgaag
ccaccggttcctttcgaaacccctggggaggccccacgccggcgaaccggcggccagaag
aggaaggcggcttcgagtatcttcgctgtctcctcctcctcctcgacatcgaaaaggcta
gtcaaggagcggaatgccctcaacatactccccagtggccacaatggtcccatcacgaga
gctaggcaattcccaggcaagatcgcagctggaagtccacagacgccgcaggagggagtt
ctgattgctgagacgctggtaggagaacttgcaaaggagatgatgttttctgaagatccg
gttaaatctgttgaggattcggcggagccgtcggatgtgactacaatggagctggaattt
gaggccgtgcgatccagaggtgtcggtgtacatgtagtcccaacttccgctggttggttt
tcatgggagaaaatccatgagctcgagaagcatgcgttgccatcatttttcaacggacag
tctgagagtaggacaccagaaatatatgtggacatacgaaattccatcatgaagaaattt
catgttgatcctcagactccaatggaggttaaagatttatctgatatatctgttggcgaa
ttaggtgctagacaagaggtgatggagtttctagatcactggggtttgatcaacttccac
cctttcccgcattccggtactgacaaaagagtgattgaagctggagccgagaaaacaacc
tctctgcttgaccagttgtaccaattcgaaaatgtggagtcattaccctgttatgttccc
aaaaaacaggaatcaccgccatcatccatgttaccacagctgcttccagaatccgccctc
cttgacgacatgatgcggccagtggatccttcagttgagtaccattgtaattcatgttca
ggcgattgctctcgcagacggtatcattgccagaaacaggcagattttgatctctgtgcg
gagtgttataataatgggaaatttggctccggcatgacaccagctgacttcattcttatg
gaatctgctgagggccctggtgtgagtagtcggagttggacagatcaggaaaccttgctt
cttttagaagccttggagctttttggcgagaactggaatgaaatagctgagcatgttgct
actaaaactaaagctcagtgcatcttgcactttcttcaaatgcctatagaagatcctttt
ctagatgtccaagaaaattctagtgacaatatgttggagaaaattgaaccatgttcagct
aataaggaatcttcagttgtgaaagtccctgaagcaattgaggttgagaatggcatgagc
tccgagcatcctgtttcgtccccagcagatgtctcggacatgaaatatgctgaagttgat
ttatgcggcgaaacttattccaactttgctgtaaactctttaaagagtgcatttcaggct
gtaggctttacaaatgatgatggaagaatgttctcatttgcagaagctggaaatcctgcc
atggtgttggtagcattcttagcgggactggttgaccaggatgctgtgtcaacttcatgc
cgcacttctttgaaatcaatgttagaggaatctcctggaactcagctggtttcaaggcat
tgctttattcttgaggagccacttaatgatgctagaagtcctgtccctgagagtgctgtt
gctgccaatggtgacttggaggctttaaaggaggaggagcagttgccaagttcgaatggt
tctgcggaattgaagaatgaaacaattaataatcagccaaatgcaaattctggacagagt
gaaatgaaacagccagcttctcctaatgagtctccacagaaatctactgtgaaagaatta
agtgattcatttctcccagtggatgtaacttctggcaacagtgagccagataataaatct
ttacctgaggaactaacatcacaatctgacaggaaggatgcaagtagttttgatgaggca
atggtaaataaaactagtaattcaaaggagttgggagattttcccgtacatgatggagat
gcaccatctatgcttaagtttgtagatgatcaaaagctttcagaggaaggcaagccagaa
tctgtggagcaatcatgtaattcagaattgattgatcaggtccaacaaatttcagaatta
acaaaagttgaagataccacgccaacatccattgtcctgaaagaggaaccagaacaaaaa
gatagtgcagattctaccttagatgttaatgtagtggcaggtggagatgataaaaagata
tcttcaccaaaaattgatataaatatttcaactacttctgatagttctcatagtgcaaac
aacataaagcgtgctgcggtcactgtgttgtcagctgctgctgtgaaggccaagcttcat
gctgaccaggaggaggaccaaatccgccaattagtgtcatgtatgattgagaagcagttg
cgcaaaatggagatcaagttggcattctttcccgagatggaaaatttgatcattagggca
aaagagcaaaccgaaagagcaagacaaaaactcatcaatgagcgaacgcagattattgca
gctagactttttcaatcccagtcttcttctagaccttatgctacaccttcagcttatgcc
aaacttgcaatgggttatggtaatatgagtataaggccaccaaacatggcatatcagagg
ccaccaccacccagaagaccttga
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