Dendrobium catenatum: 110105459
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Entry
110105459 CDS
T05027
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dct04131
]
110105459
04121 Ubiquitin system [BR:
dct04121
]
110105459
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110105459
Membrane trafficking [BR:
dct04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110105459
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110105459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Prok-RING_4
DUF7129
zf-C3H2C3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110105459
NCBI-ProteinID:
XP_028551035
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MSSASSYWCYRCSRLVRAWPQDSIVCPDCDGGFLEEVSTPPRLARQYLHGGDEASPATPR
IRRHRRAGVGDRSPFNPVIVLRSPADGGVGRDADRFELYYDDGAGSGLRPLPPSMSEFLM
GSGFERLLDQLAQIEINGLAGRRFEHPPASKAAIESMPTVEISASHVGLDCHCAVCMEAF
EIGTEAREMPCKHIYHQDCIFPWLSIRNSCPICRHQMPADQRGNGAAEAQVDARSTATVS
EDETMGLTIWRLPGGGFAVGRFSSGASAGERQLPVVYTEMDGGFNSGGAPRRISWTERES
RNQQRGGIGRLFRNFFSFFGRRRSSSSRSSPSSSPSSSESAASERHRRSRVFRFNSGLPS
VGQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggcatcctcctattggtgctaccgctgcagccgcttggtcagggcgtggccg
caggattcgatcgtctgcccggactgtgatggtggcttcctcgaagaggtctccacccca
ccccgccttgcccgccagtatctgcatggtggtgacgaggcctcacccgcgacacccagg
attcggcgccaccgacgcgccggcgttggagatcgctcccccttcaaccctgtcatcgtg
ctccgtagcccggccgatggtggtgtaggtcgcgacgcagatcgtttcgagctgtactac
gacgacggggcgggatctggtttgcgcccccttccacctagcatgtcagaatttctgatg
ggttccggcttcgagcggcttctcgaccagcttgcccagatcgagatcaacggccttgct
ggccgcagattcgagcatccgccggcatctaaggccgccatcgagtctatgccgacggtc
gagatctctgcctctcatgttggattggattgtcactgcgccgtgtgcatggaagcgttt
gagatcgggacggaagcaagggagatgccatgcaagcacatctatcatcaagattgcatc
tttccatggctctcgatacggaattcctgtccaatatgccggcaccagatgccggctgac
caaaggggtaatggagctgcagaggcccaagtggatgctcggagtaccgctacggttagt
gaggacgaaactatgggactcactatttggaggcttccgggtggtgggtttgcggttggg
aggttttccagcggggcgagtgcaggggagcgccaacttccggttgtttacactgagatg
gacggcggtttcaactccggtggtgcgccaaggaggatatcctggactgagagagagagc
aggaatcagcagaggggaggaattggccggttgtttcgcaatttcttctctttctttggg
agacggcgatcctcgtcttctcgatcatcgccctcttcttcaccatcaagttccgagtct
gcagcttctgagaggcaccgaagaagcagagtgtttaggttcaacagtggccttccttcc
gttgggcaatga
DBGET
integrated database retrieval system
