Dendrobium catenatum: 110105461
Help
Entry
110105461 CDS
T05027
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
dct03440
Homologous recombination
dct03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110105461
03420 Nucleotide excision repair
110105461
03430 Mismatch repair
110105461
03440 Homologous recombination
110105461
03460 Fanconi anemia pathway
110105461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110105461
03032 DNA replication proteins [BR:
dct03032
]
110105461
03400 DNA repair and recombination proteins [BR:
dct03400
]
110105461
Transcription factors [BR:
dct03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
110105461
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
110105461
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
110105461
MMR (mismatch excision repair)
110105461
DSBR (double strand breaks repair)
HR (homologous recombination)
110105461
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
DUF223
zf-CCHC_2
CDC24_OB3
zf-CCHC_5
zf-CCHC_4
zf-CCHC_3
zf-like
Motif
Other DBs
NCBI-GeneID:
110105461
NCBI-ProteinID:
XP_020690646
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MASLNLTSGAIAKISQGLGDKLQPVLQVAEIRLVNTQQSSAERYRMLLSDGVHHQQGMLA
TQMNGIVKSGQLQKGSIVQLSEFICNTIQSRRIIIIISLQVLVEKAEIIGEPKNYDSGNP
VLQNRVAGLGQPPEVNQPGLSIENAQHHGGSRASGPDVGQHALGDASFPRQESAVNNQSH
VGLFAGDSVPGRNVRNANFLPSKAESATAGFMESNQIGGMQPKRFPSSSNGGFQPPADSY
GRPIQSTYQQPAPIYTNRGPIAKNEAPARIIPIAALNPYQGKWTIKARVTAKADIRHYNN
ARGEGKVFSFDLLDSDGGEIRATCFNMVADQFYDQIEVGRIYLISKGTLRPTQKSFNHLN
NEYEIMLESTSTIQPCLAEDNSIPRQQFSFKPISEIESMENNSMTDLVGIVTSINPAGTI
MRKNGTETHKRTLQLKDMSGKSVEITLWGNFCNTEGQKIQGMCDSGIFPVLAIKTGRVSD
FSGKSIGTISSSQLLIDPDIPETHQLKEWYNSEGKNHTALSISREAAITVRMDVRKTVSQ
IKDEGLGRSEKPDWITVKATVSFMKADNFCYTACPLMVSDRQCNKKVNNNGDGTWHCDRC
DKSFSECDYRYLLQLQIQDHTGITWVTAFQECGEEILGVSAKELYFLKYEEQDELKFAEV
VRRVLFSQYLFKLKVKEETFSDEQRVKSTAIKAERVNPSSESRFILSMIEKLSGEDAHTV
SAIHGAYASGAGVHNSEYSHSLGGGGGRFDRYKMETSSQGGQYMNQYGGISSHSMNREVP
SFCNNCGLSGHSFQNCPRSLSELGQSTGGGFTHRSSISGMEGGNSSNVCFKCKQPGHWAR
DCPGSSSISLGFGGRDIASSVGSGHPQGTYGKQYVGGF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcttaacctaacgagtggcgcgattgcgaagatttcgcaagggttgggggac
aaactgcaacctgttcttcaagtagcggagatccggttggtgaatactcagcagagctca
gcggagaggtaccggatgcttctttccgacggtgtccaccatcagcagggaatgcttgcg
acacagatgaatgggattgttaagtctggccagctgcagaaaggatcgatcgttcaacta
agcgaatttatctgcaacaccatacaaagtcggaggattatcattataatcagcctgcaa
gttttggttgagaaggctgaaataattggggagccaaaaaattatgattctggcaatcct
gttctacaaaaccgtgttgctggtcttggacagccacctgaggtaaaccaaccaggttta
tccatagaaaatgcccaacatcatggtggttctcgagcaagtggtcctgatgttggacaa
catgctcttggggatgcttcgtttcccagacaagagtcagctgtgaacaatcaatctcat
gttggcttatttgctggtgattctgttcctgggaggaacgtcagaaatgcaaatttcttg
ccctctaaagctgaatctgctactgcgggttttatggaatcaaaccaaattggtggtatg
caaccaaaaagattcccaagctcatcaaatggaggatttcaaccccctgctgatagttac
gggcgtccaattcagtctacatatcagcaacctgctcctatctatacaaatagaggtcct
attgctaagaacgaagccccagctaggataattcccattgctgcattgaatccttatcaa
ggaaagtggacgatcaaagctagggttacggctaaggccgacatcaggcactacaataat
gcaagaggtgaaggaaaagtattctctttcgatctcctcgactctgatggtggagaaata
cgagcaacttgttttaacatggtagctgaccagttctatgatcagatagaggtagggcga
atttacttgatttccaaaggtaccttgagaccaacacaaaagagtttcaaccatcttaac
aatgaatatgaaattatgttggagtctacatccacaatccagccttgcttagcggaggat
aacagtattccaaggcagcaattcagctttaaacctattagtgaaattgagtctatggaa
aataattcaatgactgatttggtcggtatagtgacttcgattaatcctgcaggtacaata
atgagaaagaatggtaccgaaactcacaagagaactcttcaattgaaggacatgtctgga
aagagtgttgaaataactctatggggaaatttttgcaacacagaagggcagaaaatccaa
ggcatgtgcgactccggcatatttcctgtactggctataaaaacaggtcgagtcagtgat
tttagtggaaagtcaatcggtacaatttcctctagccagcttcttatagatcctgatatt
ccggagacgcaccaattaaaggaatggtataatagtgagggaaagaaccatactgccctt
tctatatccagggaagctgcaataacggtgagaatggatgtgcgtaagacagtttcacaa
attaaggatgaaggtcttggaagatctgagaagcctgactggataactgttaaggccaca
gtttcattcatgaaggctgataatttttgctacacggcatgccctttgatggtgagtgac
agacaatgcaacaagaaagttaataataatggggatgggacatggcattgtgatcggtgt
gacaaaagtttttccgagtgcgattatagatacctactccagttacagattcaggaccac
actggtattacctgggttactgctttccaagaatgcggtgaagaaatccttggtgtatct
gcaaaggaactgtactttctcaagtatgaagaacaagacgagttgaagtttgctgaggtt
gtaaggagggttcttttcagtcaatatttattcaaattaaaagtaaaagaggaaactttt
agtgatgaacaacgtgtgaagtctactgctatcaaagctgaaagggtgaatccttcatca
gagagcaggttcattttgagcatgattgagaaactttctggggaagatgctcatacagtt
tcagctattcatggagcatatgcttctggagccggagtgcataattccgaatattctcat
tctcttggcggcggcggcggccgttttgatcgatataaaatggagacttctagccaaggc
ggacaatatatgaatcaatatggtggtatttcaagccatagtatgaacagagaagtccca
tccttttgtaataactgtggtttgtctggccacagttttcagaactgtccaaggagccta
agcgagttaggacaatctactggaggtggcttcacgcacagatcatctattagtggaatg
gagggtggaaattcttctaatgtatgctttaaatgcaaacaacctggccattgggctagg
gactgtcctggatcaagctccatatctttaggttttggaggcagagacatagcttcatct
gttggaagtggtcatccacaaggaacatatggtaaacaatatgttggtggtttctaa
DBGET
integrated database retrieval system
