Dendrobium catenatum: 110105633 Help Entry 110105633         CDS       T05027                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism dct  Dendrobium catenatum Pathway dct03440   Homologous recombination dct03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:dct00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     110105633    03450 Non-homologous end-joining     110105633  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dct03032]     110105633    03400 DNA repair and recombination proteins [BR:dct03400]     110105633 DNA replication proteins [BR:dct03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     110105633 DNA repair and recombination proteins [BR:dct03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      110105633     BRCA1-C complex      110105633    NHEJ (non-homologous end-joining)     MRX complex      110105633 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 SMC_N AAA_21 SbcC_Walker_B Rad50_zn_hook AAA_15 AAA_29 ABC_tran AAA AAA_13 LPP AAA_16 Motif Other DBs NCBI-GeneID:  110105633 NCBI-ProteinID:  XP_020690871 LinkDB All DBs Position Unknown AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKHVIAFLKPLTLIVGPNGAGKTTIIECLKLACSGELPPNSR SGHSFIHDPKVLGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEFKALESVLQTI NPHTAEKVCLSYRCADMDREIPALMGVSKAILDNVIFVHQDDSNWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYKLRNSISQDEEKIESLKI QIKEWERSIQGVESKILHGETTLKELRKLQDQISSHTTARSTLFKLQQTQYAALAEENED TDEELKEWQTKFEEKIALFESKISKREREMSDEETKSSLLSQAINDSMREIGKLQAESDA NMSVKREYDSTIQRIFVKYNVGSLPDAPFSIEQANNLTNKIRTRLFVLEKDLQERKKSNE VELKLLWERYVTMNTRCSEIEGQKQAKIQSKVGISNRIKERETERDLAEQELSSLNLSHI DERERNLQIEVERKTLVLGEKDFESAINQKRTEIFSLEQKIRALYREKDVMASDSEDRVK LDLKKEEFESCKRKQKKILDELKDKVRTVLKGRLPSEKDLKKEIVNAFGSLKKEYDELNS KTLEAEKEVKVAQMKIQDSKSHLAKLRKEMDAKGRFLESKLHSMIQQSDIIDSFPKVLVE AMEKRDVQKSKYNIADGMRQMFDPFERVARAHHICPCCERPFTPKEEDDFVSKQRVKSAS SAEHMKVLAVESSNADSHFQQLDKLRMIYEEYVKLGKENIPLAEKNLQELMEDLNQKSQA YDDLLGVMAHIKAEKDTVEILVQPAELFERLFLEIQNLKPQIEDLEYKLDARGQGVKSVE EIQSQLNALQSKRDALSSEVENLREEQRFLSDDLSNIQMRWHALREEKLRASGILHKVKK AEEELILLAEEMAQAEFDEKHLAESLLPLLKDKEKAVQEHTNLKTKLDQEYEELAENKRN FQQEFEMLLKLASRIKEYLDSRRDEKLKELQDKLLLSESQLQECESKKQEILADLNKSKE VLISQDQLKRNIDDNLNYRKTKAEVDELTREIELLEEKVLAIGGTSAIETEVKKHLKEKE RLLSELNKCQGTISVYLSNVSKNKLDLKQAQYHDIDKRYFNQLIQLKTTEMANKDLDRYY VALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGIGTRSYSYRVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNTESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKDEHQHSIIEAQAIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagcaccgtggacaagatgttgatcaaaggtatacggagcttcgacccggagaacaag catgtcatcgccttcttgaaacccctcaccctcatcgttggccccaatggcgccggcaaa accaccatcattgaatgccttaagctcgcgtgcagcggggagctgcctcccaactcccgc tcgggccacagctttatccacgaccccaaggttttgggcgagacggagactaaggggcag atcaagcttcggttcaagactgctgccgggaaggatgtggtgtgcatacgctccttccag ctcacacaaaaagcttccaagatggagttcaaggccctggagagtgtactccaaaccatc aatccccacactgcagagaaggtatgcctcagttatagatgtgccgacatggatagggag attccagctctgatgggtgtctccaaagctatccttgataatgtcatattcgtccaccag gatgattcaaattggccgctacaggatccatcaacactgaagaagaaatttgatgacata ttctccgccactcgttacacgaaagccttggaggtcataaaaaagcttcacaaggatcaa gcacaggaaataaagacatataaactgaaattggagaatctccaaactcttaaagatgca gcatataagctccgtaacagcatctctcaagatgaagaaaaaattgaatctctaaaaatt caaattaaggaatgggagaggagtattcaaggtgttgagagtaaaatccttcatggagaa actaccttaaaagagttgcgtaaacttcaggatcagatatcgtcccatactactgcaaga agcactttgtttaaacttcaacagactcaatatgctgcccttgccgaggaaaatgaagat actgacgaggagttaaaagaatggcaaacaaaatttgaagaaaagatagcactgtttgaa tctaaaataagtaagcgggagagggagatgagcgatgaagagaccaaaagttctttactt tcacaggcaatcaatgattctatgcgggagattggaaagcttcaggctgaaagtgatgca aacatgtcagtgaagcgagaatatgattcaacaattcaaagaatttttgtgaagtacaac gttggatccctaccagatgctcctttcagcattgagcaggcaaacaaccttacaaataaa ataagaacaaggttgttcgttcttgaaaaagatttacaagagaggaagaaatctaatgaa gtagaactcaaacttttgtgggagcgctatgttacaatgaatactcgttgtagtgaaatt gaaggtcaaaagcaagctaagattcaatctaaggttggtatatcaaaccgcatcaaagag agagagacagagcgtgatcttgcagaacaagagctgtcaagccttaacctgtcacatata gatgaaagggaaagaaacctgcaaatagaggttgagaggaagactctggtactaggggaa aaagattttgagtctgccataaatcaaaagagaacagaaatatttagcttggaacaaaaa attagagctctttatcgtgaaaaggatgttatggcaagcgattcagaagatcgagttaag ctagatttgaagaaggaagaatttgaaagctgcaagagaaagcagaaaaaaatattggat gaacttaaagataaagttcgaaccgtgttaaaagggaggttgccttcagaaaaggacctg aaaaaggagattgtgaatgccttcggatctctaaagaaagagtatgatgagttgaactca aaaactcttgaagcggagaaggaggtgaaagtggcccagatgaaaatacaagattccaag agtcatctagccaaacttcggaaagaaatggatgccaagggaagatttctcgagtccaaa ctgcactctatgattcaacagtctgatattatcgactcctttcccaaagttttggttgaa gcaatggagaaaagagatgtgcagaaaagtaaatacaacattgctgatgggatgagacaa atgtttgacccttttgaaagggttgctcgtgcccatcatatttgtccatgctgtgagcga cctttcactcctaaggaggaggatgatttcgttagtaagcaaagagtaaaaagtgctagc tctgcagagcatatgaaggtattggcagttgagtcatcaaatgctgactcacatttccag cagttggacaagctgcgtatgatttatgaagaatatgtgaaacttgggaaagagaacata cctttagcggaaaagaatttgcaagagttgatggaagatctcaatcagaaatctcaagct tatgatgatctccttggcgttatggctcatatcaaggctgagaaggatactgtggaaatt ttggtgcaacctgcagaattgtttgaaaggttatttcttgaaattcagaatttgaaacct caaattgaggatttggagtataaacttgatgctcgagggcaaggagtgaaatctgtggag gaaattcaatcacagttgaatgcattgcaaagcaaaagggatgccttgagttctgaagta gaaaatttgagagaagagcagagattcttgagtgatgatttatctaacatacagatgagg tggcatgctcttagagaggagaagttaagggcatccggtatattacataaagtgaaaaaa gcagaagaggaattgattcttttagctgaagaaatggctcaagcggagtttgatgagaag catttagcagaatctcttcttcccttgttgaaggataaagagaaggcagttcaggaacac acaaatttgaaaacaaagttggatcaggaatatgaggaactggccgaaaacaaaagaaat tttcaacaggaatttgaaatgcttctaaaacttgcttctaggatcaaagagtacctggac tcaaggagggatgaaaaactgaaggaattgcaggacaaactcctcttatctgagtctcag ttgcaggaatgtgagagcaagaaacaggaaattttagcggatttaaacaagagtaaagag gtacttattagtcaagatcaattaaaaagaaacatagatgacaacttgaattacagaaaa acaaaggcggaagtggatgaacttactcgtgagattgaattacttgaggaaaaagtacta gccattggaggaacttctgccattgaaactgaagttaaaaaacatctaaaagaaaaagaa aggcttctgtcagagctgaataaatgtcaaggtacgatttccgtttacctaagtaatgta tcaaagaacaagcttgatcttaagcaagcacagtaccatgacattgacaagcgctacttc aaccaactcatccaactcaagaccacagaaatggcaaataaggaccttgacagatactac gttgcacttgataaggcactcatgcggtttcactccatgaaaatggaggaaataaataag atcattagagagctatggcagcagacctaccgagggcaggacattgattacataagtata cattctgattcagaaggcattggaactcgatcctacagttaccgagtccttatgcaaact ggtgatgctgagttggaaatgcgtggaaggtgcagtgctggtcaaaaggttcttgcttct cttattataagattggcactagccgagacattttgtcttaattgtggaatacttgcattg gatgaacctactactaacctggatggtccaaacaccgaaagtcttgctgcggccctcttg agaattatggaagatcgcaaggggcaagaaaattttcagctaattgttatcacccatgat gaacgttttgctcagctgatcggtcagcggcaacatgctgagaaatactatcgtgttacc aaggatgagcatcaacacagcataattgaagcccaggcgatatttgattga

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