Dendrobium catenatum: 110105872
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Entry
110105872 CDS
T05027
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
dct
Dendrobium catenatum
Pathway
dct03030
DNA replication
dct03410
Base excision repair
dct03420
Nucleotide excision repair
dct03430
Mismatch repair
dct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110105872
03410 Base excision repair
110105872
03420 Nucleotide excision repair
110105872
03430 Mismatch repair
110105872
03440 Homologous recombination
110105872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dct03032
]
110105872
03400 DNA repair and recombination proteins [BR:
dct03400
]
110105872
DNA replication proteins [BR:
dct03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
110105872
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
110105872
MMR (mismatch excision repair)
DNA polymerase delta complex
110105872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
110105872
NCBI-ProteinID:
XP_028549804
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MDGATIEDGEMKLFERKQAIYKSLDEKYLVHGQRYKGQQYSQIYFARLHHLRNLLHSLVT
KWKPHLEVITVLGLEESRECVIVGTIYKHMKLKPCILDEYSKERTAVPLVKPHNFLHPDD
QLILEDEIGRVKLRGSLLNPTDFVTGIGLALHGMKTIEGDFLVQDLLEAGFPPQTKLPRL
GEDKYVVFVSGLNVGSNIFNPLQFQLFVDHVTGHLGGDNEQKMTSQIVRVVIAGNSVIIP
HSVLNGQALTPEDQRKLTEPIKEVDILLTQLAAAVPLDIMPGPTDPANSFLPQQPLHRCL
FPGASSYNTFFSCTNPHQFELDGFQFLGTSGQNIDDLDKYSSAQTKLEFVERTLRWRHLA
PTAPNTLVVNVYTHVIRAAQVELK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgcaacgatagaggacggagagatgaagctcttcgagaggaagcaagcgatc
tacaaatccctagatgagaaatatctggtccatgggcaaaggtataaggggcagcagtac
agccagatctattttgctcgccttcaccacttgaggaatctactccactctcttgtaacc
aaatggaagcctcacctcgaagttattacagttcttggacttgaggaaagcagagaatgt
gttatagttggaactatctacaagcacatgaagctcaagccttgtatactagatgaatac
tctaaggagaggactgcggttccacttgtcaaacctcataactttttgcatccagatgat
caacttatcttggaagatgagataggaagagttaaactgagaggaagtttgcttaaccct
acagattttgtgacaggaattggtctagctcttcatggaatgaaaacaattgagggtgat
tttttggttcaagatcttttggaagctggctttcccccacaaactaagcttccacgctta
ggagaagacaagtatgttgtttttgtttcaggattaaatgttggaagcaatatttttaat
ccactacaattccagctttttgttgaccatgttactgggcatttgggtggtgataatgaa
caaaaaatgacttctcaaattgttcgtgtagtaattgctggaaactccgttataattccg
catagtgttcttaatggacaggcattaactcctgaggatcagagaaagctaactgagcca
attaaggaggttgatatcttattaacgcagcttgcagcagctgtgcctttggatattatg
ccaggtcctacggaccctgcaaattcctttttaccacagcagccactgcatagatgtctc
tttcctggagcatcctcttataatacattcttctcgtgcacaaatcctcatcaatttgaa
cttgatggttttcagttccttggaacatctggtcagaacattgatgatcttgataagtat
tcgagtgcccagactaaacttgaatttgttgagaggacgttgcgatggaggcatctggct
cctactgcccctaacacccttgttgtaaatgtttatactcatgtgattagagcagctcaa
gtagagcttaagtag
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