KEGG   Dendrobium catenatum: 110106206
Entry
110106206         CDS       T05027                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dct  Dendrobium catenatum
Pathway
dct03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110106206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dct03019]
    110106206
   03041 Spliceosome [BR:dct03041]
    110106206
Messenger RNA biogenesis [BR:dct03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110106206
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110106206
Spliceosome [BR:dct03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110106206
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 110106206
NCBI-ProteinID: XP_020691661
LinkDB
Position
Unknown
AA seq 445 aa
MENSSKKRKVDENGAALPSLSANLTPEDARKIIESFNQEQLMNIVAEAICRDEATLDFVR
QIADRDPVQRKLFIRGLGWETTTEKIRSLFSSYGELAEAVVILDKVTGKSKGYGFITFRH
IDGAILALKEPNKKIDGRVTITQLAANGVSGPTAPTPSTSDASLRKIFVGGVPAEMPFDR
LRALFSSYGEIEEGPLGFDKQSGKFKGYALFIYKTVEAAQAALVDPVKSIDGNTLQCKLA
TDGKKGRSGTVIPGAGVPGKPLVGSGGDGHGDGLGMGSQSSMPGSFSSQFGGPGGGLPSY
GGFSGSGGFPVVAAGIGQNHHLNSALQSSTGLGNSSLSSLGGQAPPSLGGSGVGSYVGSG
LNGGPYGSSLQYPGSGGYGGLGMGSSYNRIPTSSGGMPSIGYPDGGPYSSSSSIYQAQHH
QPAGSSPGTRFPPGGGMYHNIPHYF
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaaaattcctccaagaagcgcaaggtcgacgagaacggcgcggccttaccatctctg
tcggctaatctgacccctgaagatgcccgtaaaatcatcgagtctttcaaccaggagcag
ctcatgaacatcgtcgcggaggccatttgccgtgacgaggccaccctggatttcgtgcgc
cagatcgctgaccgcgaccccgtccagcgcaagcttttcatccgcggccttggatgggag
acgaccactgagaagatccggtccctcttctccagttatggtgaattggcggaggccgtg
gtcattctcgacaaagttaccggaaagagtaagggttacggattcatcactttccgacac
atcgatggcgcgattcttgccctcaaggagcccaacaagaagattgatggccgcgtgact
atcacccagcttgccgccaatggagtttccggccccacggctcccactccttctacttcc
gatgcttccctgcggaagatctttgttgggggtgtccctgctgaaatgccctttgatcgt
ctgcgtgccctctttagctcttatggggagatagaggaagggccactggggtttgataag
cagtcgggcaagtttaagggctatgccttgttcatatacaagactgtggaagcagctcaa
gcggctcttgttgaccctgtaaagagtattgatgggaataccttgcagtgcaagctggcc
accgatgggaagaaggggagatctgggactgttattccaggtgctggggtgccagggaaa
ccactggtaggcagtggaggtgatggccatggtgatgggctcgggatgggttctcagtcc
tcaatgcctggctcgttctcaagccagtttggtggccctggtggtggcttgccttcatat
ggtggtttctctggcagtggtgggttccctgtagttgcggcaggtattggccaaaatcat
catctgaactcggctttgcaatcatccactggcttaggaaattccagtttgtcatctctg
ggtggtcaggctcctccttctctagggggatcaggagttgggagctatgtgggaagtggt
ctaaatggcgggccatatggttcttcattgcagtatccaggctctggtggctatggaggt
ttgggcatgggttcttcatataatcgcataccaacaagctctggtggcatgccttctatt
ggttatcctgatggcggaccatattcttcttcttcttccatttaccaagctcaacaccat
cagcccgcagggtcatctcctggaactcggtttccacctggtggggggatgtatcacaac
attccccattatttttaa

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