Dendrobium catenatum: 110106235
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Entry
110106235 CDS
T05027
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
dct
Dendrobium catenatum
Pathway
dct04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110106235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dct04121
]
110106235
Enzymes [BR:
dct01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110106235
Ubiquitin system [BR:
dct04121
]
Ubiquitin ligases (E3)
HECT type E3
110106235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF5349
Motif
Other DBs
NCBI-GeneID:
110106235
NCBI-ProteinID:
XP_020691702
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MFFSGDPTSRRRVNLGGRSSRESDRQVVLDQARAERKRRLALRQETSAAIKIQKFFRGWR
AVELERSRIREQFCHTFGDRCQKADRSCFGAESEFLPQLLLFFSVKNSGDVAILTAACRL
ILQFVHNDGCPGDLVSIFSGNDYSTTRSVVETRVKKLVLVCMKTIHHNREVLKNQLLMPS
GMPTTILLDTVAILINSDLPWACKVTAHLLQQKIFLLLRGIILSSMNNMKEPENRSRMSS
LENVLALITFHACGHPNCCLDTDPKLCFSLQILSIPFLWHHLSYYKEVFLMQRLTKFYIH
RLASCLPGHASILPNGVSLDFPSHACLLGNLIEVAAAVFSDQSYSLTTIMDFVLVLSFLF
EALPKLKSSAGAGYFDDDMSVDEGTNEFLDTNLERQIKDAMDSRFFQLLVNALFKDTSLI
RHRYESAPSDEEIEAIGSICAFLHVTFNTLPSERIMTGLAYGTDLVLIIWSFIKYCQENQ
TWPLFTKLTAYIPDVAPRWLLSLAVFCPVYKYMLTIMDNEEFYEQERPISLSDIRLLVII
LKQALWQLLWVVPATMSPQKLGTDFFANKKLSVETIRTSARAMISELLNQLQDWNNRRSF
TSAGDFHAFEASSEAFVAQALTENSRASELLKQAPFLVPFTSRVKIFNAQLAASKQQIGA
YSLHRNRFRIRRNRIFEDAFNQLSVLSTEELRGSIRVSFVNEFGVEEAGIDGGGIFKDFM
ENITQAAFNVQYGLFKETSDHLLYPNPGSGVIHEQHLQYFDFLGSLLGKAMYEGILVDIP
FATFFLSKLKQKHNYLNDLPSLDPELYRHLLFLKHYQGDVSELELYFVIINNEYGEQKEE
ELLLGGKDIHVTKENVITYIHLIANHRLNYQIRHQSSHFLRGFQQLIEKEWIEMFSEHEI
QILISGSLENFDMDDLRSHAHYSGGYDQNHPVIDMFWEVLKSFSFVYQKKFLKFVTGCSR
GPLLGFRYLEPKFCIQRAAPLHAAEEDLDRLPTSATCMNLLKLPPYKSIEQMRNKLIYAI
NADAGFDLS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagcggggacccgacctcgcgcaggagagtgaacttggggggacgtagctcc
agggagagtgaccggcaggtggttcttgatcaggcgcgagctgagcggaagcggcggcta
gcccttcggcaggagacctctgccgccatcaagatccagaaattcttcagaggttggagg
gctgttgaattggaacgatcaaggatacgtgagcagttctgccatacattcggtgatcgc
tgtcaaaaagcagatcggagctgctttggtgctgagtcagagtttctgcctcagctactc
cttttcttctcagtaaagaacagtggtgatgtagctatcctgacagcggcttgccgatta
atacttcagtttgttcataacgatggttgcccaggggatcttgtgagtatcttttccgga
aatgattattccactacgcgttctgttgtggagacgagggtcaaaaagcttgtgcttgtc
tgcatgaagacaatccaccataacagggaagtcttgaagaatcaacttctgatgccatct
ggtatgcctacaactattttattggatacagtggccatcttaataaactctgatcttcca
tgggcctgcaaggttactgctcatcttttgcagcaaaagatcttcctcttattgcgtggc
atcattctcagcagcatgaataacatgaaagagccagaaaatcgttcgcggatgtcttcc
ttggagaatgttcttgctctaattacttttcatgcttgtgggcatccaaattgttgttta
gacacggatccaaaactgtgcttctcgttgcaaatcttgtcaatcccttttttgtggcat
catctttcatattataaggaggttttcttgatgcaaagactcacaaagttctatatccat
agattggcaagctgcttgcctggtcatgcatctatccttccaaatggcgtttctcttgat
tttccaagtcatgcctgtctacttggtaatttaatagaagttgctgcggctgttttttct
gatcaaagctacagcctcactacaatcatggattttgtacttgtcttaagctttttattt
gaggcgcttccaaaattgaaatcatcagctggagctgggtattttgatgatgacatgagc
gtggatgagggaactaacgaatttttggatacaaatctggaaaggcagataaaagatgca
atggattcacgtttttttcaacttttggtaaatgcattgtttaaggatacatcacttatt
cgtcatagatatgaaagtgctccatctgatgaagagattgaagccattggttctatttgt
gctttcctgcatgtgacattcaatacattgccttctgaacgtatcatgactgggctagct
tatggaactgatctcgttcttataatatggagttttattaagtattgtcaagaaaatcaa
acatggccactttttacaaaacttactgcatatattcctgatgttgctccacgctggcta
ttatctttggctgttttctgtccagtgtataagtatatgctgacaatcatggacaatgag
gaattctatgagcaggaaagaccaatatccttgagtgatatcaggctcttagttatcata
ttaaaacaggctttatggcaactcctttgggtggtacctgctactatgtctcctcagaaa
cttggaactgatttctttgccaataagaagctctcagttgaaacaataagaactagtgct
cgtgctatgatatctgaactcttgaaccagttgcaagattggaacaatagaaggtcgttc
acctcagctggtgattttcatgcttttgaagcaagcagtgaagcttttgtagctcaggcg
ctaactgaaaatagcagagcatccgagttactgaaacaggctccgtttctggtaccattt
acaagcagggttaaaatattcaatgcgcaacttgcagcttcaaagcaacaaattggtgct
tattctctacatagaaatcggtttcggataagaagaaatagaatttttgaagatgctttc
aatcagttgagtgtgctgtcaacagaagaactcagaggctcgattcgtgtttcctttgtc
aatgaatttggggtagaggaggctggaattgatggtggtggtatttttaaggatttcatg
gagaacatcactcaagcagctttcaatgtgcaatatgggctgtttaaggaaactagtgat
caccttttatatccaaatcctggatcaggagtgattcatgagcagcacctacaatatttt
gactttcttggaagcctacttggaaaggcaatgtatgaaggtattcttgtagacatacca
tttgcgacattcttcctcagcaaattgaaacaaaagcacaactatttgaatgacttgcct
tcacttgatccggaattgtatcgccatcttctctttctaaagcattatcaaggcgatgtt
tcagagttggaactttattttgttattataaataacgaatatggggaacaaaaagaagaa
gagttactccttggaggaaaagatattcacgttacaaaggaaaatgttatcacatacatt
catctcatagctaatcatcggttaaattatcagattcggcatcaaagttcacattttttg
cgtggatttcagcaacttatagagaaagaatggattgaaatgttcagcgagcatgaaatc
cagattctcatatcaggttcccttgagaactttgatatggatgatctacgttctcatgct
cattattcaggtggctacgatcaaaatcatccggtgattgatatgttctgggaagttttg
aaaagtttctcattcgtgtatcagaagaaattcctgaaatttgttacaggatgttctcgt
gggccccttcttggatttagatacctggagcctaaattctgcatacaaagagctgctcct
ttacatgctgccgaagaagatctggatcgtttgccaacttctgcaacctgcatgaatttg
ctgaagctccctccatataaaagcatagagcaaatgagaaacaaattgatctatgccata
aatgcggatgctggttttgatctaagttaa
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integrated database retrieval system
