Dendrobium catenatum: 110106306
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Entry
110106306 CDS
T05027
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A
KO
K11267
sister chromatid cohesion protein PDS5
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dct03036
]
110106306
03400 DNA repair and recombination proteins [BR:
dct03400
]
110106306
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
110106306
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
110106306
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
LBR_tudor
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
110106306
NCBI-ProteinID:
XP_020691826
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MAQKLQQQLREVGSKLQSQPASKDALIKLLKQAENCLSELEQSPPPSMLGAMKPCFDAIA
KEDVLKHQDRDVRVLVAACICEITRITAPEAPYSDDVLRDIFDLIVSTFSGLKDTNTPSF
KRTVIILETLARYRSCVVMLDLECYDLINDMFQIFFSVVSDEHPNNVRASMQTIMVLILD
ESEEIQENLLVTILSPLGRKRSEFTMAARKLAMNVIEHCAGKLEPSIRHFLISSLSGDSS
NLNSTLDYHEVIYDLYQCVPQILSGIIPFMTGELLADKLDIRQKAVQLLGDLFALSGIPI
SESFQPLFSEFVKRLTDRVADIRVSVIGHLKNCLMLNTSRPEAPLIIKALSDRLLDYDEN
VRKHVVAAICDLACHSVKVIPVETAKIVAERLRDKSLSVKWYTVGRLADVYRCYCLKHTN
ALLNDDDFEWIPGRVLRCLYDKDFRPETIEFILCGSLFPRDLAIRDRVKHWIKVFSTFER
VEVKALEQILLQKQRLQQEFLKYLTLRQTRQDNVPEIQKKLNGFFRFMSRMFHDAAKAEE
GFQMLNQLKDQNIWKLMMILLDPDTSFCQAWSCRDELLKILGERHSLYEFMDMLTVKCSY
LFFNKELVKEIILESDEQRSSGDVKFILSCMDLLTVIASFSPHLFIGCEEDLVHLLKEDN
DIIKEGITRVLAKAGGTIREQLAMTSSPVDLVLERLCLEGTRKQAKFAVHAIAAITKDDG
LKSLSVLYKRLVDMLEKKTHLPSILQSLGCIAQIAMPVFETREDEIVEFISKKVLKRSND
TAAALDGIDWNERTELCSLKMLGIKTLVKSYLPAKDAPSRTGIDKLVALLRNVLAYGDIS
KDVESSAVDKAHMRLTAAKSVLRLSRLWDHMIPLDVFYITLRISEDVYPQFRTLFISKVH
QYIKDRLLDAKYACAFLLNINQYQSPEYKEAKHNLLEVVQICQQLKQRQISMQNDVSSSV
MYPESILVYLVHALAHHPSCPNIDECLELSAFEPIYWRLHLFLSVLLIGDEGWQSGACSD
RRKDSYTSVVSIFRSIKCSEDAADSAKSRTSHAISDLGLSITKKLVPDQADVSEIANTVS
LPASLYKASDKDEESSVINGEQSWLSGESALAHFEALMFEDKEQILSVINKDEILLEKDN
DDNDVPLGKMMKLLKCQGTKKKKAKGQTSNFDLKSKDEDVDVLGMVREINLDTIKAARSM
EHGSQKRKRSEASQATSSVVAPTPKRKRSSSIHRSPSSNLDKKQHVSLIESEFLLSSLPK
IQSTSRRGKKKGDRSYTDEVSVIDMKNVSVTEGSHKKGSGSSAKKRKVRSISGLSKSSSK
KTRPNGELVGSRIKVWWPLDNMFYEGVVHSFDRGNKKHSILYDDGDVEVLRLETEKWELI
PNGWTPKKRSKSQQSSSHEQLSMDINDHSNDHNSQGNNKPTKRSAADSNLGVRHISGKSS
QSHGRRVSKNDINADNSIHIKFDSEATDVHPHSGSEIDDVNLEFEAKESSTPVKIADETK
VNTSDVSKELPEKGDDTSSPKTMEDSDDEPLSSWRQRAAKTG
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaagctgcagcagcagttgagagaagttggttcgaaacttcagagtcaacca
gcttcaaaggatgcgctgatcaaactcttaaagcaagcggaaaactgtctatctgaattg
gaacaatcaccaccaccttctatgctgggtgcaatgaagccatgttttgatgcaattgca
aaagaagatgttttaaagcaccaagatagggatgtgagagttcttgtggcagcatgtatt
tgtgagatcactcggataacagctcctgaagcaccttatagtgatgatgttctcagggac
atttttgatttgattgtaagtacatttagcggtttaaaggatactaacactccatctttt
aagaggacggttataatcctggagacacttgcaagatacagatcatgtgttgtgatgttg
gatcttgagtgttatgacctcataaatgatatgttccaaatttttttcagtgttgtcagt
gatgagcatccaaataacgttcgtgcttcaatgcaaacaatcatggtccttatacttgat
gaaagtgaggagatacaggagaatctactagttaccatattgtctcctttgggccgtaaa
aggagtgagtttacaatggcagccaggaagcttgctatgaatgtgatagagcattgtgct
ggaaagcttgaaccttccatacggcattttcttatctcatcactatctggagatagcagt
aacttgaatagtacacttgattatcatgaagtcatttatgatttatatcagtgtgttcca
caaattctttctggaataattccatttatgactggagaattgctggcagataagttagac
attcgacagaaggcagtccaactacttggagacctatttgctttatcaggaattcctatt
tccgaatcttttcagccgcttttctctgagtttgtgaaaagattgactgatagggttgct
gatattcgtgtttctgtaattggacacttgaagaattgcttgatgttgaacacttcccga
cctgaagctcctctgataattaaggctctctcagatcggttattggattatgatgaaaat
gttcgcaagcatgttgttgccgcaatttgtgatctagcatgccattctgtcaaagtcata
ccagttgaaactgctaaaatagtggcagagcgcctccgtgacaaatctctctctgtcaaa
tggtacaccgtggggaggctggctgatgtttacagatgttattgtttgaagcatacaaat
gctttgttaaatgatgatgattttgaatggatacctggcagagtattacggtgcttatat
gacaaagattttagaccagagacaattgaattcattttgtgcggctctttgttcccccgt
gatttggcaattagagatagagtaaaacattggattaaagtgttctctacatttgagaga
gtagaagtgaaggcacttgagcagattctgctacagaagcaaaggttacagcaagagttt
ctgaagtatttgactcttagacagacccgtcaggataatgtcccagagatccaaaagaag
cttaatggttttttccgctttatgtcccgcatgtttcatgatgctgctaaggcagaggaa
ggttttcagatgcttaatcagttaaaagaccagaatatatggaaattaatgatgatcttg
cttgatccagacaccagtttctgtcaagcttggtcatgccgggatgagttgcttaagatc
cttggagaaaggcattcgctttatgaatttatggatatgcttacagtaaagtgctcatac
ttattctttaacaaggagcttgtcaaggaaattattttagaatctgacgagcaaagatct
tctggtgatgtaaaattcattttgtcatgcatggacctactaacggtaatagcttctttt
tctccccacctttttattgggtgcgaagaggatcttgtgcatctgctgaaggaggacaat
gacataattaaagaaggaattactcgtgttttagcaaaagcaggagggaccattcgagaa
cagttggctatgacatcaagccctgttgatctagtactagaacggctatgtctagagggt
actcgcaagcaagctaaatttgctgtacatgctatagccgcaataaccaaagatgatggt
ctcaagtcactttctgttttatacaagaggcttgtggatatgttggagaagaaaacacac
cttccatccatattgcaatctcttgggtgtatagcacaaattgcaatgccagtttttgaa
actagggaagatgaaattgtggagtttatatccaagaaagtcttgaagcgtagtaatgat
acggctgctgctttggacggtattgattggaatgaaagaactgaactctgttcattaaag
atgcttggcatcaaaactttggtgaagagttatttacctgccaaagatgctccttcacga
actgggattgataagcttgtggcattgctcagaaatgttctagcgtatggtgatatctca
aaagacgtggaatcaagtgctgttgacaaggcgcatatgaggcttactgcagcaaaatct
gtccttcggttgtcaaggctgtgggaccatatgatacctcttgacgtcttctatataacc
ttgaggatttcagaggatgtataccctcagtttaggacattattcatcagcaaagtgcat
cagtacatcaaggatcgattgttggatgcgaagtatgcctgtgctttcttgttaaacata
aaccagtatcagtctcctgaatataaggaggccaaacataatctactggaggttgttcaa
atttgtcagcaacttaaacaacgacagatctctatgcaaaatgatgtgagttcctcagta
atgtatccagagagtattcttgtttatttggttcatgctcttgcgcaccacccatcatgc
ccaaatattgatgagtgcttggagctatcagcctttgaacccatttactggcggttgcat
ttatttctttctgtgctgttaattggagatgaaggttggcaatcgggagcttgttctgac
aggagaaaggatagttatacttcagttgtatctattttccgtagtataaagtgttcagaa
gatgcagctgatagtgcaaagtcaagaacatcacatgctatatcggatcttggactgtca
attacaaagaagttagttcctgatcaagcggatgtttcagagatagctaatacagtttca
ttgccagccagtttatacaaggcttctgataaggacgaagagagctccgtgatcaatggc
gagcagtcttggctgagtggtgaaagtgcgttggcacattttgaagctcttatgtttgag
gataaagaacagattctctcagttatcaacaaggatgaaatactcttggagaaagacaac
gatgataatgatgttcctctgggaaaaatgatgaaacttcttaaatgccagggaactaaa
aagaaaaaagcaaaaggacaaacttcgaattttgatttgaaaagtaaagatgaagatgtt
gatgttcttggaatggtgcgagaaatcaatttggacaccataaaagcagctaggagtatg
gaacatggtagtcagaaaagaaaacgaagtgaagcgagtcaagcaactagcagcgtggtt
gctccaactcctaaacgcaaaaggtcaagcagtattcacagatccccctcttcgaacctg
gataagaagcagcatgtttccttaatagaatcagaatttttgctttcctctttgccaaaa
atacaaagcacatctaggcgtggaaagaaaaaaggagatcgatcatatactgatgaagtt
tccgtgattgacatgaagaacgtctctgtcacagaaggctctcacaagaaaggtagtggc
agttctgcaaaaaaacgtaaagttagaagtatctctggcttgtcgaagagttcatcaaag
aagactcggcccaatggagaactggttggatctagaattaaagtttggtggcctttagat
aacatgttctacgaaggcgtcgtgcattcctttgatcgtggaaacaagaaacacagtata
ttgtatgatgatggtgatgttgaagtgcttcgactagaaacggagaaatgggagcttata
ccaaatggctggacacctaaaaagcgatccaaaagccagcagtcctcgtctcatgaacaa
ctctcgatggacataaatgatcatagcaatgaccataattctcaaggaaataataagcct
acgaaaaggtcggcggctgattctaatcttggagtaagacatatctcaggaaaaagttcc
caatctcatggcagaagggtatcaaaaaatgacatcaatgcagacaatagtatacatatt
aaatttgattcagaggcaacggatgttcatcctcattctggatcagagattgatgatgtt
aatttagaatttgaagcaaaagaatcttcaactccagtaaaaatagccgatgaaaccaaa
gtgaacacatcagatgtgtccaaagagttacccgaaaaaggcgacgatacttccagtccg
aaaaccatggaagattcagacgacgagccccttagttcatggagacaacgtgctgccaaa
actggctga
DBGET
integrated database retrieval system
